RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 TAGLN3Q9UI15 199 aa7.81□□□□□ -1.16
NEDD4L-218ENST00000587547 PCDHGA9Q9Y5G4 932 aaKnown RBP7.81□□□□□ -1.16
NEDD4L-218ENST00000587547 POLEQ07864 2286 aa7.81□□□□□ -1.16
NEDD4L-218ENST00000587547 A0A096LPI6 279 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 TRBV11-1A0A0K0K1C0 115 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 ZG16O60844 167 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 CBX7O95931 251 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 HPP00738 406 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 UQCRC2P22695 453 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 TRPC1P48995 793 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 NUDT2P50583 147 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 CCL11P51671 97 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 CASP9P55211 416 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 MXRA7P84157 204 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 PRR5P85299 388 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 GABPB1Q06547 395 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 FUT7Q11130 342 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 MAP4K2Q12851 820 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 ZNF155Q12901 538 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 DUSP8Q13202 625 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 ART3Q13508 389 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 CAPRIN1Q14444 709 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 KRT72Q14CN4 511 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 TRMT5Q32P41 509 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 SPNS3Q6ZMD2 512 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 GDF7Q7Z4P5 450 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 WDR53Q7Z5U6 358 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 DMRTC2Q8IXT2 367 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 KIF2BQ8N4N8 673 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 CISD2Q8N5K1 135 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 TRIML2Q8N7C3 387 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 PCYOX1LQ8NBM8 494 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 NFAM1Q8NET5 270 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 NUP43Q8NFH3 380 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 OR56A1Q8NGH5 318 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 GOT1L1Q8NHS2 421 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 PNPT1Q8TCS8 783 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 SFXN5Q8TD22 340 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 ZNF721Q8TF20 911 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 THAP3Q8WTV1 239 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 PNPLA2Q96AD5 504 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 FAM120BQ96EK7 910 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 VMP1Q96GC9 406 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 AURKBQ96GD4 344 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 FBXL20Q96IG2 436 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 NSL1Q96IY1 281 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 SLC35G5Q96KT7 338 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 IP6K3Q96PC2 410 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 GAL3ST4Q96RP7 486 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 YIPF4Q9BSR8 244 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 PAIP1Q9H074 479 aaKnown RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 OR10A5Q9H207 317 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 PTGFRNQ9P2B2 879 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 C19orf53Q9UNZ5 99 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 ERVK-11Q9UQG0 969 aa7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 POLR3KQ9Y2Y1 108 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-218ENST00000587547 DNAJC13O75165 2243 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 ANKHD1Q8IWZ3 2542 aaKnown RBP7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 A0A087WV62 115 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 UPK1AO00322 258 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 PLOD2O00469 737 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 KLF4O43474 513 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 PLOD3O60568 738 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 DPM1O60762 260 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 PRAMEF2O60811 474 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 COQ9O75208 318 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 ERN1O75460 977 aaKnown RBP7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 SLITRK5O94991 958 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 C1QCP02747 245 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 CLPSP04118 112 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 ITGAMP11215 1152 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 NID1P14543 1247 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 S1PR1P21453 382 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 CLCN2P51788 898 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 EXT1Q16394 746 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 NNATQ16517 81 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 COQ5Q5HYK3 327 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 HLA-DQA1Q5Y7H0 255 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 LYPD4Q6UWN0 246 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 DLEU7Q6UYE1 221 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 TMEM64Q6YI46 380 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 SLC29A4Q7RTT9 530 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 C6orf120Q7Z4R8 191 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 RNF130Q86XS8 419 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 MSRB3Q8IXL7 192 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 KBTBD2Q8IY47 623 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 OR2L13Q8N349 312 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 DPP10Q8N608 796 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 OR7G1Q8NGA0 311 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 OR1N1Q8NGS0 311 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 C16orf52Q8NHV5 167 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 PSMA8Q8TAA3 256 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 JADE3Q92613 823 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 NACC2Q96BF6 587 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 MOAP1Q96BY2 351 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 CTHRC1Q96CG8 243 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 OTUB1Q96FW1 271 aaPredicted RBP7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 C16orf58Q96GQ5 468 aa7.79□□□□□ -1.16
NEDD4L-218ENST00000587547 THOC3Q96J01 351 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms