RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 PNLIPRP2P54317 469 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 POU6F2P78424 691 aaPredicted RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 LRRC74AQ0VAA2 488 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 FOXO1Q12778 655 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 UBAP2LQ14157 1087 aaKnown RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 SAXO2Q658L1 398 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 ZNF324BQ6AW86 544 aaPredicted RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 TNFAIP8L2Q6P589 184 aaPredicted RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 ZAR1Q86SH2 424 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 TRIML2Q8N7C3 387 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 ZFP62Q8NB50 900 aaPredicted RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 TMCO6Q96DC7 493 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 NEURL3Q96EH8 262 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 STACQ99469 402 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 ELAC2Q9BQ52 826 aaKnown RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 SLX1AQ9BQ83 275 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 BTBD2Q9BX70 525 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 OSBPL11Q9BXB4 747 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 ANGPTL4Q9BY76 406 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 TTTY12Q9BZ98 90 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 PIGUQ9H490 435 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 DUSP22Q9NRW4 184 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 FBXO34Q9NWN3 711 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 MRTO4Q9UKD2 239 aaKnown RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 RELNP78509 3460 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 ANKRD33BA6NCL7 494 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 LRRC3CA6NJW4 275 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 J3QKU1 62 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 SCO2O43819 266 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
USP3-205ENST00000557884 UTS2O95399 124 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 OR12D1P0DN82 309 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 EVI2BP34910 448 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 PTGDSP41222 190 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 UQCRFS1P47985 274 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 MASP1P48740 699 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 TDGF1P3P51864 188 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 PSMD4P55036 377 aaKnown RBP13.13□□□□□ -0.31
USP3-205ENST00000557884 MRPL49Q13405 166 aaKnown RBP13.13□□□□□ -0.31
USP3-205ENST00000557884 TBCELQ5QJ74 424 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 ATCAYQ86WG3 371 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 RNF130Q86XS8 419 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 SIAH3Q8IW03 269 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 GTF2H4Q92759 462 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 AURKBQ96GD4 344 aaPredicted RBP13.13□□□□□ -0.31
USP3-205ENST00000557884 ZNF597Q96LX8 424 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 NSRP1Q9H0G5 558 aaKnown RBP13.13□□□□□ -0.31
USP3-205ENST00000557884 OR51I1Q9H343 314 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 IL1RL2Q9HB29 575 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 SLC52A3Q9NQ40 469 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
USP3-205ENST00000557884 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
USP3-205ENST00000557884 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 C17orf51A8MQB3 221 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 ACOT7O00154 380 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 GNB5O14775 395 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 CDC40O60508 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP3-205ENST00000557884 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
USP3-205ENST00000557884 UNC5CO95185 931 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 RFPL3SP0C7P2 107 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 EDN3P14138 238 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 GNLYP22749 145 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 PTPN6P29350 595 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 TRPC1P48995 793 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 KHKP50053 298 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 STX5Q13190 355 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 GRAMD1BQ3KR37 738 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 PAGE3Q5JUK9 113 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 COX20Q5RI15 118 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 DCST2Q5T1A1 773 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 OLIG3Q7RTU3 272 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 CPLX4Q7Z7G2 160 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 SLC22A16Q86VW1 577 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 TMEM251Q8N6I4 163 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 OR52N2Q8NGI0 321 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 FAM110BQ8TC76 370 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 XAGE5Q8WWM1 108 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 RAB8BQ92930 207 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 GPR137Q96N19 417 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 NMUR2Q9GZQ4 415 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 PAIP1Q9H074 479 aaKnown RBP13.12□□□□□ -0.31
USP3-205ENST00000557884 DEFB127Q9H1M4 99 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 SAR1AQ9NR31 198 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 TMEM45AQ9NWC5 275 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 FAM53CQ9NYF3 392 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 SEC14L3Q9UDX4 400 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 HRH3Q9Y5N1 445 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 MYO18BQ8IUG5 2567 aa13.12□□□□□ -0.31
USP3-205ENST00000557884 TENM4Q6N022 2769 aa13.11□□□□□ -0.31
USP3-205ENST00000557884 GCN1Q92616 2671 aaKnown RBP13.11□□□□□ -0.31
USP3-205ENST00000557884 NPIPA5A0A0B4J1W7 369 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms