RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 PHC1P78364 1004 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 TP53BP2Q13625 1128 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 DUSP5Q16690 384 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 FAM174BQ3ZCQ3 159 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 SPANXN4Q5MJ08 99 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 EXOSC6Q5RKV6 272 aaKnown RBP9.77□□□□□ -0.85
LINC00239-201ENST00000556973 FNDC7Q5VTL7 733 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 C1QL3Q5VWW1 255 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 CDC73Q6P1J9 531 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 MTFR2Q6P444 385 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 ANGPTL8Q6UXH0 198 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 TRILQ7L0X0 811 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 FGD2Q7Z6J4 655 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 DOLPP1Q86YN1 238 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 CLECL1Q8IZS7 167 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 SLC16A11Q8NCK7 471 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 OR4A15Q8NGL6 344 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 ADAMTS15Q8TE58 950 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 RNF138Q8WVD3 245 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 PIK3R3Q92569 461 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 DTNBP1Q96EV8 351 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 TEX37Q96LM6 180 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 YIPF4Q9BSR8 244 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 G6PC3Q9BUM1 346 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 CCDC28BQ9BUN5 200 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 ZNF703Q9H7S9 590 aaPredicted RBP9.77□□□□□ -0.85
LINC00239-201ENST00000556973 MED4Q9NPJ6 270 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 SDR39U1Q9NRG7 319 aaPredicted RBP9.77□□□□□ -0.85
LINC00239-201ENST00000556973 SDHAF3Q9NRP4 125 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 DUSP22Q9NRW4 184 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 ZIM2Q9NZV7 527 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 BTNL2Q9UIR0 455 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 ABCG2Q9UNQ0 655 aa9.77□□□□□ -0.85
LINC00239-201ENST00000556973 GTF3C1Q12789 2109 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 DUXAA6NLW8 204 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 AQP7O14520 342 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 GNB5O14775 395 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 BCKDKO14874 412 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 SNPHO15079 494 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 POLR3GO15318 223 aaPredicted RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 ZNHIT1O43257 154 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 FADS1O60427 444 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 TRAPPC6AO75865 159 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 KCNK2O95069 426 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 CPSF4O95639 269 aaKnown RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 LDLRP01130 860 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 HPNP05981 417 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 PGRP06401 933 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 CELA3AP09093 270 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 ESRRAP11474 423 aaPredicted RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 MATN1P21941 496 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 UQCRC2P22695 453 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 PTPN6P29350 595 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 IL12AP29459 219 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 EVI2BP34910 448 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 RFX3P48380 749 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 MAN2A2P49641 1150 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 GAS1P54826 345 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 AQP5P55064 265 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 IRX1P78414 480 aaPredicted RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 LASP1Q14847 261 aaKnown RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 TOMM20Q15388 145 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 C3AR1Q16581 482 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 C6orf120Q7Z4R8 191 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 FJX1Q86VR8 437 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 ANKRD46Q86W74 232 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 PLCZ1Q86YW0 608 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 EID3Q8N140 333 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 MIER2Q8N344 545 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 FAM57AQ8TBR7 257 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 JADE3Q92613 823 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 SARAFQ96BY9 339 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 RMND5BQ96G75 393 aaPredicted RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 OR52E6Q96RD3 313 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 BTBD2Q9BX70 525 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 UBQLN3Q9H347 655 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 EXO5Q9H790 373 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 GALNT9Q9HCQ5 603 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 TCF7L2Q9NQB0 619 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 GPATCH2Q9NW75 528 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 SUCOQ9UBS9 1254 aaKnown RBP9.76□□□□□ -0.85
LINC00239-201ENST00000556973 TINAGQ9UJW2 476 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 C15orf41Q9Y2V0 281 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 WIF1Q9Y5W5 379 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 TENM4Q6N022 2769 aa9.76□□□□□ -0.85
LINC00239-201ENST00000556973 NUP214P35658 2090 aaPredicted RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 NPIPA2E9PIF3 369 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 NPIPA3F8WFD2 350 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 EDF1O60869 148 aaKnown RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 UTS2O95399 124 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 IGKV1D-16P01601 117 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 TPOP07202 933 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 SOAT1P35610 550 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 MRPL19P49406 292 aaKnown RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 POLR2JP52435 117 aaKnown RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 DGKQP52824 942 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 STX1BP61266 288 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 POU6F2P78424 691 aaPredicted RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 C17orf67Q0P5P2 114 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms