RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 UBASH3BQ8TF42 649 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 RASSF5Q8WWW0 418 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 COL26A1Q96A83 441 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 ELP4Q96EB1 424 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 RNF31Q96EP0 1072 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 TMEM80Q96HE8 168 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 TMEM168Q9H0V1 697 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 MIXL1Q9H2W2 232 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 BCL2L10Q9HD36 194 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 DZANK1Q9NVP4 752 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 SEC14L4Q9UDX3 406 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 STUB1Q9UNE7 303 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 CMAHPQ9Y471 501 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 MAU2Q9Y6X3 613 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
TRIM25-202ENST00000537230 CSF3P09919 207 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 PIPP12273 146 aaPredicted RBP12.05□□□□□ -0.48
TRIM25-202ENST00000537230 HOXB2P14652 356 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 ACSL1P33121 698 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 GSTM5P46439 218 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 MLLT1Q03111 559 aaPredicted RBP12.05□□□□□ -0.48
TRIM25-202ENST00000537230 SCN1BQ07699 218 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 HNRNPA0Q13151 305 aaKnown RBP12.05□□□□□ -0.48
TRIM25-202ENST00000537230 GINS1Q14691 196 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 PHC2Q8IXK0 858 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 FRMD1Q8N878 549 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 MFSD9Q8NBP5 474 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 NUP43Q8NFH3 380 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 OR9Q1Q8NGQ5 310 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 FAM131CQ96AQ9 280 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 OR2M4Q96R27 311 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 GDF15Q99988 308 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 TSSK6Q9BXA6 273 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 CARD8Q9Y2G2 431 aa12.05□□□□□ -0.48
TRIM25-202ENST00000537230 YARS2Q9Y2Z4 477 aaKnown RBP12.05□□□□□ -0.48
TRIM25-202ENST00000537230 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 A0A087WUU8 490 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 A0A1W2PQL4 384 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 P2RX6O15547 441 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CTSVO60911 334 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 DDX5P17844 614 aaKnown RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CSNK2A2P19784 350 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CMPK1P30085 196 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 TRHRP34981 398 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 GALK2Q01415 458 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 GLYR1Q49A26 553 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CCDC58Q4VC31 144 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 TMEM64Q6YI46 380 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 NOXA1Q86UR1 476 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CAMKK1Q8N5S9 505 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SLC16A11Q8NCK7 471 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 ZCCHC10Q8TBK6 192 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 NACC2Q96BF6 587 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 GIMAP5Q96F15 307 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SCARF2Q96GP6 870 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 DIRAS2Q96HU8 199 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SLC9A8Q9Y2E8 581 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 GPR52Q9Y2T5 361 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 HYKKA2RU49 373 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CCDC182A6NF36 153 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 FABP12A6NFH5 140 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CPSF4LA6NMK7 179 aaKnown RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 B4DXG7 233 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 TMCC2O75069 709 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 ENDOUP21128 410 aaKnown RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 GIPRP48546 466 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 ABATP80404 500 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 TMEM201Q5SNT2 666 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 C22orf42Q6IC83 251 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 FBXO42Q6P3S6 717 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 PAQR7Q86WK9 346 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 OR7G2Q8NG99 324 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 OR8J1Q8NGP2 316 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 BBS10Q8TAM1 723 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 PATE1Q8WXA2 126 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 WDFY2Q96P53 400 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 GABRG3Q99928 467 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SARGQ9BW04 601 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SLC22A4Q9H015 551 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 KIR3DX1Q9H7L2 352 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 NDUFB11Q9NX14 153 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 RABL2AQ9UBK7 228 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 KLF15Q9UIH9 416 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SSR3Q9UNL2 185 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 CENPVL1A0A0U1RR11 272 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 SLC35F4A4IF30 521 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 ZNF860A6NHJ4 632 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 MYL9P24844 172 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 AVPR1BP47901 424 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 RNF144AP50876 292 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 PDX1P52945 283 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 ID2Q02363 134 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 DBPQ10586 325 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-202ENST00000537230 DEFB134Q4QY38 66 aa12.04□□□□□ -0.48
TRIM25-202ENST00000537230 FLYWCH1Q4VC44 716 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms