RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 C4orf19Q8IY42 314 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 COL27A1Q8IZC6 1860 aaPredicted RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 KCTD6Q8NC69 237 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 KIAA0895Q8NCT3 520 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ZNF740Q8NDX6 193 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 OR2A12Q8NGT7 310 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 OCC1Q8TAD7 63 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 SETD6Q8TBK2 473 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 RAET1EQ8TD07 263 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 UCN3Q969E3 161 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 NOL4LQ96MY1 436 aaPredicted RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 OR2M2Q96R28 347 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 CPXM1Q96SM3 734 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 TXN2Q99757 166 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 COQ7Q99807 217 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 NRIP2Q9BQI9 281 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ATG101Q9BSB4 218 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 SLC26A1Q9H2B4 701 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 CCDC68Q9H2F9 335 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ZNF430Q9H8G1 570 aaPredicted RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 LMAN1LQ9HAT1 526 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 SIRT7Q9NRC8 400 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 MRPL17Q9NRX2 175 aaKnown RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 ELOVL2Q9NXB9 296 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 GDAP2Q9NXN4 497 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 TECRQ9NZ01 308 aaKnown RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 BCCIPQ9P287 314 aaKnown RBP eCLIP0.17□□□□□ -2.38
COPB1-212ENST00000534771 TRPC4Q9UBN4 977 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 TEKT2Q9UIF3 430 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ANGPTL2Q9UKU9 493 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ITM2BQ9Y287 266 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 SNX8Q9Y5X2 465 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ADGRL1O94910 1474 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 PASKQ96RG2 1323 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 IGLV3-12A0A075B6K2 115 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 IGHV1OR15-1A0A075B7D0 117 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 IGKV2-24A0A0C4DH68 120 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 A0A0J9YVX5 310 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ANKRD18BA2A2Z9 1011 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 URADA6NGE7 173 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ANXA2P2A6NMY6 339 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 J3QRE1 110 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 PDLIM1O00151 329 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 CHUKO15111 745 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 FAM189A1O60320 539 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 AKR7A3O95154 331 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SNAPINO95295 136 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 TXNDC12O95881 172 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 RPN1P04843 607 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 PGK2P07205 417 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 VIMP08670 466 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 ZCCHC18P0CG32 403 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 PNMA6AP0CW24 399 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 NR2F1P10589 423 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 IGLL1P15814 213 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 COX7A1P24310 79 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ADORA2BP29275 332 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 MAGEB1P43366 347 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 IER3P46695 156 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SH3BGRP55822 239 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 PRPS1P60891 318 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 RPS4XP62701 263 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 MRPS11P82912 194 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 FOLH1Q04609 750 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SLC34A1Q06495 639 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 AIMP1Q12904 312 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 BNIP1Q12981 228 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SLC39A6Q13433 755 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 DPYSQ14117 519 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ZNF273Q14593 569 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 IRF4Q15306 451 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 UBE2SQ16763 222 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 CYP51A1Q16850 503 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 HKDC1Q2TB90 917 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 COX19Q49B96 90 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 GPAT3Q53EU6 434 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 CMPK2Q5EBM0 449 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 PIGGQ5H8A4 983 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ERMARDQ5T6L9 678 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SHEQ5VZ18 495 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ITPRIPL1Q6GPH6 555 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 KRT80Q6KB66 452 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 MZT2BQ6NZ67 158 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SIGLEC15Q6ZMC9 328 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 TMEM182Q6ZP80 229 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 Q6ZR03 302 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 FAM220AQ7Z4H9 259 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 TSEN54Q7Z6J9 526 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 DNAJB7Q7Z6W7 309 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 LCA5Q86VQ0 697 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 C17orf82Q86X59 251 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 UBALD2Q8IYN6 164 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 CCAR2Q8N163 923 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 OR4L1Q8NH43 312 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 UBLCP1Q8WVY7 318 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 FAM151AQ8WW52 585 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 OR1E3Q8WZA6 343 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ULK4Q96C45 1275 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 PGAP3Q96FM1 320 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 NPAS2Q99743 824 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms