RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CLCA1A8K7I4 914 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 UPK1AO00322 258 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 SLC28A1O00337 649 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 RGS14O43566 566 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 ZIC3O60481 467 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 SHBGP04278 402 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 KRT4P19013 534 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 EVI2BP34910 448 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 MC3RP41968 323 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 SLCO1A2P46721 670 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 STARP49675 285 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 LHX2P50458 406 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 IST1P53990 364 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 GAS1P54826 345 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 PSMD4P55036 377 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 SORDQ00796 357 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 PSG6Q00889 435 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 LIPMQ5VYY2 423 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 FBXW10Q5XX13 1052 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 TMEM107Q6UX40 140 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 ADGRE4PQ86SQ3 457 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 OR2L13Q8N349 312 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 RNF138Q8WVD3 245 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 NRGNQ92686 78 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 ELP4Q96EB1 424 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 AMDHD1Q96NU7 426 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 PIGMQ9H3S5 423 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 GLIPR2Q9H4G4 154 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 C3orf14Q9HBI5 128 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 Q9N2J8 555 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 DDX18Q9NVP1 670 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 JKAMPQ9P055 326 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 PPP4R1LQ9P1A2 415 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 MID2Q9UJV3 735 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 CBLCQ9ULV8 474 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 ABCG2Q9UNQ0 655 aa11.26□□□□□ -0.61
CAPRIN1-213ENST00000533562 ACANP16112 2415 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 SMIM23A6NLE4 172 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 CHEK2O96017 543 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 PEPDP12955 493 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 PRPH2P23942 346 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 TACR1P25103 407 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 DIO3P55073 304 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 FOXF2Q12947 444 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 GANABQ14697 944 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 PRSS53Q2L4Q9 553 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 GRAMD2AQ8IUY3 354 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 GSPT2Q8IYD1 628 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 CHDHQ8NE62 594 aaPredicted RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 INTS12Q96CB8 462 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 FOXC2Q99958 501 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 TRMOQ9BU70 441 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 RBM24Q9BX46 236 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 DSN1Q9H410 356 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 PTGES2Q9H7Z7 377 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 CCM2LQ9NUG4 571 aaPredicted RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 C1orf109Q9NX04 203 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 ST6GALNAC2Q9UJ37 374 aa11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 RPH3AQ9Y2J0 694 aaPredicted RBP11.25□□□□□ -0.61
CAPRIN1-213ENST00000533562 UQCRHLA0A096LP55 91 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 NPIPB8E9PQR5 432 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 LINC01387J3KSC0 135 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 AZIN1O14977 448 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 SCO2O43819 266 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 FADS1O60427 444 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 GOSR1O95249 250 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 KCNH1O95259 989 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 PSMG1O95456 288 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 IL33O95760 270 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CRHP06850 196 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 IFI6P09912 130 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 ZNF708P17019 499 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 DNASE1P24855 282 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 GABRA3P34903 492 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 GPC1P35052 558 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CPA2P48052 419 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CLDN18P56856 261 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 VPS26BQ4G0F5 336 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CLEC6AQ6EIG7 209 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 OR2A2Q6IF42 318 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 P4HA3Q7Z4N8 544 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CDC20BQ86Y33 519 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 C10orf107Q8IVU9 208 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 FADS6Q8N9I5 356 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CEP70Q8NHQ1 597 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 LINC01560Q8TB33 94 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 DUSP19Q8WTR2 217 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 LMF2Q9BU23 707 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 G6PC3Q9BUM1 346 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 LRTM1Q9HBL6 345 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 HHATLQ9HCP6 504 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 FAM120CQ9NX05 1096 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 MED11Q9P086 117 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CLCF1Q9UBD9 225 aa11.24□□□□□ -0.61
CAPRIN1-213ENST00000533562 CCL27Q9Y4X3 112 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms