RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OR6C74A6NCV1 312 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FAM47E-STBD1D6RA91 191 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PLD2O14939 933 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TP53P04637 393 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 CLEC2LP0C7M8 214 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PCSK2P16519 638 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 NTSP30990 170 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TGM3Q08188 693 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FBXO43Q4G163 708 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 NRROSQ86YC3 692 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PARP16Q8N5Y8 322 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 NLGN4YQ8NFZ3 816 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 OR2L5Q8NG80 312 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 OR7G2Q8NG99 324 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 POP5Q969H6 163 aaKnown RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 SLC35A4Q96G79 324 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ART5Q96L15 291 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ADAP2Q9NPF8 381 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PLCXD1Q9NUJ7 323 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TOR4AQ9NXH8 423 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ZC3H12DA2A288 527 aaKnown RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 PRR19A6NJB7 356 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PROM1O43490 865 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 DPM1O60762 260 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 CDC123O75794 336 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 THEGLP0DJG4 465 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PRG2P13727 222 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PPP2R1BP30154 601 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 AKT2P31751 481 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ETV5P41161 510 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ETV1P50549 477 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 NKX2-5P52952 324 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 UGT2B15P54855 530 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TPTEP56180 551 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TAS2R41P59536 307 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 CSTF1Q05048 431 aaKnown RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 ZNF91Q05481 1191 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 DEFB110Q30KQ9 67 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 SMARCD3Q6STE5 483 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TAF8Q7Z7C8 310 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 KIF18BQ86Y91 864 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PIK3R3Q92569 461 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 CDS1Q92903 461 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 RELTQ969Z4 430 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ELP4Q96EB1 424 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TM9SF2Q99805 663 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 NUAK2Q9H093 628 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PCBD2Q9H0N5 130 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FKBP14Q9NWM8 211 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 WNT16Q9UBV4 365 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 SCML1Q9UN30 329 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ENTPD4Q9Y227 616 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 COLEC10Q9Y6Z7 277 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 SLC35F4A4IF30 521 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 A6NL46 340 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 PRICKLE3O43900 615 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 PIP5K1CO60331 668 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 CSO75390 466 aaKnown RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 F3P13726 295 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 CSNK2A2P19784 350 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 MPIP34949 423 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 HSD17B2P37059 387 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FRKP42685 505 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 ILF3Q12906 894 aaKnown RBP eCLIP8.86□□□□□ -0.994e-7■■■■□ 21.7
CUX1-206ENST00000437600 ILKQ13418 452 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 RUNX2Q13950 521 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 SPHARQ15513 63 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FLYWCH1Q4VC44 716 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 SLC35F1Q5T1Q4 408 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FCRLBQ6BAA4 426 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 RRM2BQ7LG56 351 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 C16orf62Q7Z3J2 963 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 KRT73Q86Y46 540 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 ZNF614Q8N883 585 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 Q8N9G6 341 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 DTX3Q8N9I9 347 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 C7orf57Q8NEG2 295 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 TP53INP1Q96A56 240 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 OPALINQ96PE5 141 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 FAIM2Q9BWQ8 316 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 SLC38A1Q9H2H9 487 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 HHATLQ9HCP6 504 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 B3GNT3Q9Y2A9 372 aa8.86□□□□□ -0.99
CUX1-206ENST00000437600 EP300Q09472 2414 aaPredicted RBP8.86□□□□□ -0.99
CUX1-206ENST00000437600 ASCC3Q8N3C0 2202 aaKnown RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 METTL15A6NJ78 407 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 B4DGG1 531 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 DLGAP3O95886 979 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 FHP07954 510 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 TEAD1P28347 426 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 CD40LGP29965 261 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 STXBP1P61764 594 aaKnown RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 SLC48A1Q6P1K1 146 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 FIGNL1Q6PIW4 674 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 ZNF730Q6ZMV8 503 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SYT13Q7L8C5 426 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SYT14Q8NB59 555 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 TMEM52Q8NDY8 209 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms