RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SDSLQ96GA7 329 aa14.58□□□□□ -0.08
PTPRF-206ENST00000429895 TOE1Q96GM8 510 aaKnown RBP14.58□□□□□ -0.08
PTPRF-206ENST00000429895 MAELQ96JY0 434 aaKnown RBP14.58□□□□□ -0.08
PTPRF-206ENST00000429895 TSNAXQ99598 290 aaKnown RBP14.58□□□□□ -0.08
PTPRF-206ENST00000429895 HEMK1Q9Y5R4 338 aaPredicted RBP14.58□□□□□ -0.08
PTPRF-206ENST00000429895 TRAV18A0A075B6X5 111 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ATG12O94817 140 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 EMC10Q5UCC4 262 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 BAIAP2L2Q6UXY1 529 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 MARVELD2Q8N4S9 558 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 OR4D6Q8NGJ1 314 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 TSPEARQ8WU66 669 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 MSANTD3Q96H12 275 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 SULT4A1Q9BR01 284 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 CCM2LQ9NUG4 571 aaPredicted RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 DUOX1Q9NRD9 1551 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 FOXD2O60548 495 aaPredicted RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ADH6P28332 368 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 CHRNEQ04844 493 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 C9orf135Q5VTT2 229 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ANKK1Q8NFD2 765 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ZMYND19Q96E35 227 aaPredicted RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 SCRN2Q96FV2 425 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 FOXN4Q96NZ1 517 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 FEVQ99581 238 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 USP36Q9P275 1121 aaKnown RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 MITFO75030 526 aaPredicted RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 MTNR1AP48039 350 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ERVPABLB-1P60509 514 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 RAB33AQ14088 237 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 CDKN3Q16667 212 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 PELI2Q9HAT8 420 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 PTBP2Q9UKA9 531 aaKnown RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 RHBDD3Q9Y3P4 386 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 NPC1O15118 1278 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 TYROBPO43914 113 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 HPRP00739 348 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 DNASE1P24855 282 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 HMGCLP35914 325 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 MELKQ14680 651 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 CLLU1OSQ5K130 101 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ZNF695Q8IW36 515 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 PNPLA1Q8N8W4 532 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 RLN3Q8WXF3 142 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 FBRSQ9HAH7 460 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 DCDC2BA2VCK2 349 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 KLHL33A6NCF5 533 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 NPIPB15A6NHN6 443 aaPredicted RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ARGFXA6NJG6 315 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 SULT2B1O00204 365 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 SGSHP51688 502 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 SH3BP2P78314 561 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 TMEM53Q6P2H8 277 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 BLOC1S3Q6QNY0 202 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 WDR53Q7Z5U6 358 aaPredicted RBP14.57□□□□□ -0.08
PTPRF-206ENST00000429895 PXKQ7Z7A4 578 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 NAGSQ8N159 534 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 ZNF619Q8N2I2 560 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 OR6C4Q8NGE1 309 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 TMEM40Q8WWA1 233 aa14.57□□□□□ -0.08
PTPRF-206ENST00000429895 H7C2Y5 167 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 FRS3O43559 492 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 MPIG6BO95866 241 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 GABRR1P24046 479 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 IL4RP24394 825 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ERP29P30040 261 aaKnown RBP14.56□□□□□ -0.08
PTPRF-206ENST00000429895 HTR6P50406 440 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 LANCL3Q6ZV70 420 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ACVR1CQ8NER5 493 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 MS4A4EQ96PG1 132 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ABCG5Q9H222 651 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 SLC9B1P1A6NJY1 282 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ANKRD30BLA7E2S9 258 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 DRD1P21728 446 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 SLC5A8Q8N695 610 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 OR4K5Q8NGD3 323 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 OR5D16Q8NGK9 328 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 SLC2A12Q8TD20 617 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 NETO1Q8TDF5 533 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 A0A0J9YY10 115 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 PRAMEF26H0Y7S4 382 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 SERPINA5P05154 406 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 KRBOX4Q5JUW0 171 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 C3P1Q6ZMU1 363 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 TCEAL4Q96EI5 215 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ZNF681Q96N22 645 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 OR4K3Q96R72 315 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ADAMTS6Q9UKP5 1117 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 TRBV11-1A0A0K0K1C0 115 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 CREBL2O60519 120 aaPredicted RBP14.56□□□□□ -0.08
PTPRF-206ENST00000429895 CNR2P34972 360 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 SUOXP51687 545 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 ZNF136P52737 540 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 CDHR3Q6ZTQ4 885 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 SDR9C7Q8NEX9 313 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 OR9Q2Q8NGE9 314 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
PTPRF-206ENST00000429895 RETREG1Q9H6L5 497 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 FAM189A1O60320 539 aa14.56□□□□□ -0.08
PTPRF-206ENST00000429895 LCKP06239 509 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms