RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 WLSQ5T9L3 541 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 BICRALQ6AI39 1079 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 TMEM211Q6ICI0 200 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 EPGNQ6UW88 154 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 RPTNQ6XPR3 784 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 TRILQ7L0X0 811 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 OR4A15Q8NGL6 344 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 RMND5BQ96G75 393 aaPredicted RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 GNRHR2Q96P88 292 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 TBL1XR1Q9BZK7 514 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 TP63Q9H3D4 680 aaPredicted RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 PIGUQ9H490 435 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 MED4Q9NPJ6 270 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 DUSP22Q9NRW4 184 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 C15orf41Q9Y2V0 281 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 WIF1Q9Y5W5 379 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 FIGNL2A6NMB9 653 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 NPIPA2E9PIF3 369 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 NPIPA3F8WFD2 350 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 SNPHO15079 494 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 AGR2O95994 175 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 HPNP05981 417 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 ALDOCP09972 364 aaKnown RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 CYP4B1P13584 511 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 UQCRC2P22695 453 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 EVI2BP34910 448 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 ANXA11P50995 505 aaKnown RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 NME5P56597 212 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 UFM1P61960 85 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 HBA1P69905 142 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 IRX1P78414 480 aaPredicted RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 SRSF1Q07955 248 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHD1-202ENST00000414220 FAM174BQ3ZCQ3 159 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 WDR53Q7Z5U6 358 aaPredicted RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 MIER2Q8N344 545 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 SLC16A11Q8NCK7 471 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 OR4K17Q8NGC6 315 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 PIK3R3Q92569 461 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 HOXB13Q92826 284 aaPredicted RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 GIMAP5Q96F15 307 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 BTBD2Q9BX70 525 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 HOXD1Q9GZZ0 328 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 CXorf36Q9H7Y0 433 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 PTGES2Q9H7Z7 377 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 RMND5AQ9H871 391 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 TCF7L2Q9NQB0 619 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 SIRT3Q9NTG7 399 aaPredicted RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 PPP4R1LQ9P1A2 415 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 GPR45Q9Y5Y3 372 aa13.45□□□□□ -0.26
CHD1-202ENST00000414220 GCN1Q92616 2671 aaKnown RBP13.45□□□□□ -0.26
CHD1-202ENST00000414220 LRRC3CA6NJW4 275 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 E9PLN8 166 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 ANKRD28O15084 1053 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 AK1P00568 194 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 LDLRP01130 860 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 PGRP06401 933 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 HOXD4P09016 255 aaPredicted RBP13.44□□□□□ -0.26
CHD1-202ENST00000414220 RFPL3SP0C7P2 107 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 MATN1P21941 496 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 SPANXN4Q5MJ08 99 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 C6orf120Q7Z4R8 191 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 CD163Q86VB7 1156 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 C16orf58Q96GQ5 468 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 OR52E6Q96RD3 313 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 PANX1Q96RD7 426 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 VKORC1Q9BQB6 163 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 SIKE1Q9BRV8 207 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 YIPF4Q9BSR8 244 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 GALNT9Q9HCQ5 603 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 SLCO1B3Q9NPD5 702 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 EXD2Q9NVH0 621 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 BTNL2Q9UIR0 455 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 TINAGQ9UJW2 476 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 MYO18BQ8IUG5 2567 aa13.44□□□□□ -0.26
CHD1-202ENST00000414220 PRRC2CQ9Y520 2896 aaKnown RBP13.43□□□□□ -0.26
CHD1-202ENST00000414220 SVILO95425 2214 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 C15orf38-AP3S2A0A0A6YYH1 394 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 RNF103-CHMP3A0A140T963 221 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 GXYLT2A0PJZ3 443 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 WIPF3A6NGB9 483 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 FAM47E-STBD1D6RA91 191 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 SCDO00767 359 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 SCO2O43819 266 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 WISP2O76076 250 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 UTS2O95399 124 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 ACP2P11117 423 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 GABRA1P14867 456 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 PTPN6P29350 595 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 CHI3L1P36222 383 aaPredicted RBP13.43□□□□□ -0.26
CHD1-202ENST00000414220 MAP3K8P41279 467 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 AQP5P55064 265 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 TXNL4AP83876 142 aaKnown RBP13.43□□□□□ -0.26
CHD1-202ENST00000414220 C17orf67Q0P5P2 114 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms