RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 RBBP4Q09028 425 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 CAMK2DQ13557 499 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 FGL2Q14314 439 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 C12orf73Q69YU5 71 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 TMIGD1Q6UXZ0 262 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 ZNF852Q6ZMS4 543 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 TECPR1Q7Z6L1 1165 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 UFD1Q92890 307 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 SGTBQ96EQ0 304 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 C1GALT1C1Q96EU7 318 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 ATF6BQ99941 703 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 WACQ9BTA9 647 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 RIOK2Q9BVS4 552 aaKnown RBP10.47□□□□□ -0.73
CUX1-204ENST00000393824 NMNAT1Q9HAN9 279 aaPredicted RBP10.47□□□□□ -0.73
CUX1-204ENST00000393824 LMAN1LQ9HAT1 526 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 ARL15Q9NXU5 204 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 DNAJC27Q9NZQ0 273 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 REV1Q9UBZ9 1251 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 MALT1Q9UDY8 824 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 RAB23Q9ULC3 237 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 MAB21L2Q9Y586 359 aa10.47□□□□□ -0.73
CUX1-204ENST00000393824 CACNA1IQ9P0X4 2223 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 TECTAO75443 2155 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 A0A1B0GVI7 797 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 A0A1W2PPL8 197 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 TCRBV21S2A2A0A5A6 115 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 AGAP14A8MT82 685 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 RNGTTO60942 597 aaKnown RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 PSIP1O75475 530 aaKnown RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 ADAP00813 363 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 OPN1SWP03999 348 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 HMGN1P05114 100 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 C6P13671 934 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 HSD3B1P14060 373 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 JUPP14923 745 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 GABRG2P18507 467 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 BTF3P20290 206 aaKnown RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 XPAP23025 273 aaPredicted RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 HSD3B2P26439 372 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 POU1F1P28069 291 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 ASMTP46597 345 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 CENPAP49450 140 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 TPMTP51580 245 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 DSG2Q14126 1118 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 LIPJQ5W064 366 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 ZNF57Q68EA5 555 aaPredicted RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 CORO6Q6QEF8 472 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 LUZP2Q86TE4 346 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 SYT14Q8NB59 555 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 GEMIN6Q8WXD5 167 aaKnown RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 KLK6Q92876 244 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 SENP5Q96HI0 755 aaPredicted RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 TSSK6Q9BXA6 273 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 HDAC8Q9BY41 377 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 REG4Q9BYZ8 158 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 LDAHQ9H6V9 325 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 ZNF222Q9UK12 451 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 FBXL21Q9UKT6 434 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 SPIN1Q9Y657 262 aaPredicted RBP10.46□□□□□ -0.73
CUX1-204ENST00000393824 TRPM6Q9BX84 2022 aa10.46□□□□□ -0.73
CUX1-204ENST00000393824 hCG_1807616A0A1W2PRN6 198 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 IGLON5A6NGN9 336 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 C1QTNF3-AMACRE9PGA6 284 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 LZTS3O60299 673 aaPredicted RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 ACSM4P0C7M7 580 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 MPC1LP0DKB6 136 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 LAMP1P11279 417 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 RHCEP18577 417 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 ACSL1P33121 698 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 SPAM1P38567 509 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 NSG1P42857 185 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 MRPS21P82921 87 aaKnown RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 SP140Q13342 867 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 TUSC1Q2TAM9 212 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 CRTC2Q53ET0 693 aaPredicted RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 HENMT1Q5T8I9 393 aaKnown RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 BCL2L15Q5TBC7 163 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 MZT2AQ6P582 158 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 RASGRP3Q8IV61 690 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 MS4A15Q8N5U1 240 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 SRFBP1Q8NEF9 429 aaKnown RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 HMGB4Q8WW32 186 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 CIDECQ96AQ7 238 aaPredicted RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 INTS12Q96CB8 462 aaKnown RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 COQ10AQ96MF6 247 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 OR2M2Q96R28 347 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 UBL7Q96S82 380 aaPredicted RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 DUSP26Q9BV47 211 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 IFT46Q9NQC8 304 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 MED9Q9NWA0 146 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 ZNF282Q9UDV7 671 aaPredicted RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 TESQ9UGI8 421 aaKnown RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 CRLS1Q9UJA2 301 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 ADAM30Q9UKF2 790 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 MMP17Q9ULZ9 603 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 ZFR2Q9UPR6 939 aaKnown RBP10.46□□□□□ -0.74
CUX1-204ENST00000393824 ENPP4Q9Y6X5 453 aa10.46□□□□□ -0.74
CUX1-204ENST00000393824 TRDV1A0A1B0GX56 115 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SMIM30A4D0T7 59 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ZNF98A6NK75 572 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms