RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 RTL10Q7L3V2 364 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 NUDT13Q86X67 352 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 KLHDC1Q8N7A1 406 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 AQP11Q8NBQ7 271 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 RGMAQ96B86 450 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 CXorf49A8MYA2 514 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM127O75204 238 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 POLR2CP19387 275 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 HOXD13P35453 343 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 PMPCAQ10713 525 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 PYURFQ96I23 114 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 HHIPQ96QV1 700 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 FAM53CQ9NYF3 392 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 EXO1Q9UQ84 846 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 A6NCN8 305 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 BRINP1O60477 761 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 MAP2K4P45985 399 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC25A11Q02978 314 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM115Q12893 351 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 LIPKQ5VXJ0 399 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF679Q8IYX0 411 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 CCDC71LQ8N9Z2 235 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 IFI44Q8TCB0 444 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 IGSF8Q969P0 613 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 SH3BGRL2Q9UJC5 107 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 COPS3Q9UNS2 423 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 CLIC1O00299 241 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 ERI3O43414 337 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 VEGFDO43915 354 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 AMY2AP04746 511 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 CX3CR1P49238 355 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 NCBP2P52298 156 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 HNRNPKP61978 463 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 KCNJ11Q14654 390 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 EMC10Q5UCC4 262 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR10K2Q6IF99 312 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 GID4Q8IVV7 300 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR13J1Q8NGT2 312 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC2A13Q96QE2 648 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 PDE7BQ9NP56 450 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 HRASLS2Q9NWW9 162 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 MKS1Q9NXB0 559 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 HRH3Q9Y5N1 445 aa13.35□□□□□ -0.27
RAPGEF1-202ENST00000372190 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 A0A0D9SG52 128 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 IGLON5A6NGN9 336 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 H0Y8G0 127 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 APBB3O95704 486 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 PPT1P50897 306 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 SUMO1P63165 101 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 RFPL4BQ6ZWI9 263 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF551Q7Z340 670 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 KDM8Q8N371 416 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF454Q8N9F8 522 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 GPR151Q8TDV0 419 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 RNF128Q8TEB7 428 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ESAMQ96AP7 390 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 LDAHQ9H6V9 325 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 AKTIPQ9H8T0 292 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ERVMER34-1Q9H9K5 563 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 TAS2R16Q9NYV7 291 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF850A8MQ14 1090 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 BCAS2O75934 225 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 RAB28P51157 221 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 FAM69AQ5T7M9 428 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM25Q86YD3 366 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 MTERF1Q99551 399 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 DUSP26Q9BV47 211 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 MMP28Q9H239 520 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 MRPL15Q9P015 296 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 B3GNT3Q9Y2A9 372 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 MEIOCA2RUB1 952 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ECI2O75521 394 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ARSAP15289 507 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 HOXB9P17482 250 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 GPX6P59796 221 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 Q6ZVL8 140 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 CCDC116Q8IYX3 515 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM125Q96AQ2 219 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 CGREF1Q99674 301 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 MRPL22Q9NWU5 206 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 SCML1Q9UN30 329 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR5K4A6NMS3 321 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF726A6NNF4 738 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 LILRB3O75022 631 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 HPRP00739 348 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 MAOBP27338 520 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 SHMT2P34897 504 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 NOVP48745 357 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 HLCSP50747 726 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 CD47Q08722 323 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 CMPK2Q5EBM0 449 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 CEACAM19Q7Z692 300 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 IGFN1Q86VF2 1251 aa13.34□□□□□ -0.27
RAPGEF1-202ENST00000372190 KLHDC9Q8NEP7 349 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms