RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SGTAO43765 313 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ORC5O43913 435 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 PRAMEF10O60809 474 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 PSIP1O75475 530 aaKnown RBP10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 POP7O75817 140 aaKnown RBP10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 SLCO2B1O94956 709 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 OPN1SWP03999 348 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 GPC1P35052 558 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 SOX3P41225 446 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 HTR2BP41595 481 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 OR1E2P47887 323 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 HBA1P69905 142 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 GPLD1P80108 840 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 HSPA14Q0VDF9 509 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 MAB21L1Q13394 359 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 TP53BP2Q13625 1128 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 TPBGQ13641 420 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 HEPACAMQ14CZ8 416 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ELOCQ15369 112 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 DEFB133Q30KQ1 61 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ESCO2Q56NI9 601 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 PYDC2Q56P42 97 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF730Q6ZMV8 503 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 IKBIPQ70UQ0 350 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF547Q8IVP9 402 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 SLC25A45Q8N413 288 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 YIPF7Q8N8F6 280 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 SAP25Q8TEE9 199 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 APOBEC4Q8WW27 367 aaKnown RBP10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 WDR34Q96EX3 536 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 NT5DC2Q9H857 520 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 FGF20Q9NP95 211 aaPredicted RBP10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 MYNNQ9NPC7 610 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 TOR4AQ9NXH8 423 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 SLC23A2Q9UGH3 650 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ADAM30Q9UKF2 790 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 ICKQ9UPZ9 632 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 KCNK6Q9Y257 313 aa10.76□□□□□ -0.69
TSPAN1-201ENST00000372003 A0A0B4J293 547 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 GPR89AB7ZAQ6 455 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 B8ZZF3 427 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 ICMTO60725 284 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 FURINP09958 794 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 MSL3P1P0C860 447 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 GPR89BP0CG08 455 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 FAM157BP0CG42 384 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 NR2F6P10588 404 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 GALP22466 123 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 AZGP1P25311 298 aaKnown RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 RRAS2P62070 204 aaPredicted RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 BTG1P62324 171 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 CD83Q01151 205 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 ILF3Q12906 894 aaKnown RBP eCLIP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 HNRNPA0Q13151 305 aaKnown RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 SUZ12Q15022 739 aaKnown RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 SEC23BQ15437 767 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 TATDN3Q17R31 274 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 CEP78Q5JTW2 689 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 COX20Q5RI15 118 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 DCST1Q5T197 706 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 STPG1Q5TH74 334 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 TRIQKQ629K1 86 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 BICRALQ6AI39 1079 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 REEP3Q6NUK4 255 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 MED27Q6P2C8 311 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 CD200R1LQ6Q8B3 271 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 IDO2Q6ZQW0 420 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 QSOX2Q6ZRP7 698 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 RFPL4BQ6ZWI9 263 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 LAPTM4BQ86VI4 370 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 ELMOD2Q8IZ81 293 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 SPERTQ8NA61 448 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 OR56A3Q8NH54 315 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 CDC26Q8NHZ8 85 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 SETD7Q8WTS6 366 aaKnown RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 ASZ1Q8WWH4 475 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 DEDD2Q8WXF8 326 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 PPCDCQ96CD2 204 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 RNF31Q96EP0 1072 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 MARVELD1Q9BSK0 173 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 TSSK6Q9BXA6 273 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 OSGEPL1Q9H4B0 414 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 PPP1R3EQ9H7J1 279 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 A4GALTQ9NPC4 353 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 ATP13A2Q9NQ11 1180 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 TESQ9UGI8 421 aaKnown RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 GPR34Q9UPC5 381 aa10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 EXO1Q9UQ84 846 aaKnown RBP10.75□□□□□ -0.69
TSPAN1-201ENST00000372003 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 GNG14A0A1W2PPG7 69 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 J3KTA2 159 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 SLC30A4O14863 429 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 YKT6O15498 198 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 NOS1APO75052 506 aaPredicted RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 OR2B3O76000 313 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 CCNYL3P0C7X3 344 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 POU2F1P14859 743 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms