RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FAM111BQ6SJ93 734 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 RAD9BQ6WBX8 426 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 SYCE1Q8N0S2 351 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 GBP7Q8N8V2 638 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 OR2M3Q8NG83 312 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 OR7G3Q8NG95 312 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 OR5M1Q8NGP8 315 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM45AQ8TCE6 357 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 ADAD1Q96M93 576 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 STMN4Q9H169 189 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 XAB2Q9HCS7 855 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 CBLN4Q9NTU7 201 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
HERPUD1-206ENST00000563343 A0A0A6YYJ9 748 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 IGHV4-61A0A0C4DH41 118 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 E7EQL1 145 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 SLCO1B7G3V0H7 640 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 H3BML4 177 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 LY6HO94772 140 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 CBX7O95931 251 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 FESP07332 822 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM58BPP0C7Q3 252 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 NR2F6P10588 404 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 DRD5P21918 477 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 AGTR1P30556 359 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 PPICP45877 212 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 VPS41P49754 854 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ARFIP1P53367 373 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 CDH11P55287 796 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 IRF8Q02556 426 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 MAP4K2Q12851 820 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 CHIT1Q13231 466 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 EXOSC7Q15024 291 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 PDCD2Q16342 344 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 PDK4Q16654 411 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 TMEM44Q2T9K0 475 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 LINC01559Q495D7 138 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 PAGE2BQ5JRK9 111 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 SFRP5Q5T4F7 317 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 TEDDM1Q5T9Z0 273 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 OR52E8Q6IFG1 317 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 MFSD12Q6NUT3 480 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 GSTA5Q7RTV2 222 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ADAMTSL2Q86TH1 951 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF619Q8N2I2 560 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 NKAPQ8N5F7 415 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 C3orf56Q8N813 242 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 PPM1NQ8N819 430 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF511Q8NB15 262 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 HSD17B8Q92506 261 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 KAT2AQ92830 837 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 GFM2Q969S9 779 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 TMBIM1Q969X1 311 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 RGMAQ96B86 450 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 CMTM7Q96FZ5 175 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ADGRG7Q96K78 797 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 COL21A1Q96P44 957 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 LRRC1Q9BTT6 524 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 HDHD5Q9BXW7 423 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 RTN4RQ9BZR6 473 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF696Q9H7X3 374 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 DDX31Q9H8H2 851 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ZBTB26Q9HCK0 441 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 NGBQ9NPG2 151 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 FANCFQ9NPI8 374 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 FAIMQ9NVQ4 179 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 FBXO34Q9NWN3 711 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 LYARQ9NX58 379 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 MAT2BQ9NZL9 334 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 NPAP1Q9NZP6 1156 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 CORO1CQ9ULV4 474 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 ZKSCAN5Q9Y2L8 839 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 PLLPQ9Y342 182 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 CMYA5Q8N3K9 4069 aa6.85□□□□□ -1.31
HERPUD1-206ENST00000563343 NCF1BA6NI72 391 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 NCF1CA8MVU1 366 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM157AC9JC47 383 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 LINC01387J3KSC0 135 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TMPRSS2O15393 492 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 STK16O75716 305 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 WISP3O95389 354 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 NTN1O95631 604 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TGFAP01135 160 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CSF3P09919 207 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CTAGE8P0CG41 777 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CCDC166P0CW27 439 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 PCNAP12004 261 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CPMP14384 443 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 NCF1P14598 390 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 PGAM1P18669 254 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 HK1P19367 917 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 NT5EP21589 574 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 PIK3R1P27986 724 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 NR4A2P43354 598 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 EMDP50402 254 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CTBP2P56545 445 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TAS2R39P59534 338 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 RPS3AP61247 264 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 DUSP2Q05923 314 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms