RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SLC44A2Q8IWA5 706 aaPredicted RBP15.18■□□□□ 0.02
CDT1-202ENST00000562747 FAM109AQ8N4B1 249 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 OR52N2Q8NGI0 321 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 CEP70Q8NHQ1 597 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 PIWIL2Q8TC59 973 aaKnown RBP15.18■□□□□ 0.02
CDT1-202ENST00000562747 TMBIM1Q969X1 311 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 SLC35A4Q96G79 324 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 MAGED4Q96JG8 741 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 LMF2Q9BU23 707 aaKnown RBP15.18■□□□□ 0.02
CDT1-202ENST00000562747 DOHHQ9BU89 302 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 ANGPTL4Q9BY76 406 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 ACBD3Q9H3P7 528 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 C3orf14Q9HBI5 128 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 ZFP64Q9NPA5 681 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 PLSCR2Q9NRY7 297 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 MARCOQ9UEW3 520 aaPredicted RBP15.18■□□□□ 0.02
CDT1-202ENST00000562747 ITGB1BP2Q9UKP3 347 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 ZNF835Q9Y2P0 537 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 FAM166BA8MTA8 275 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 ZNHIT1O43257 154 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 UGT2B11O75310 529 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 NME6O75414 186 aaPredicted RBP15.17■□□□□ 0.02
CDT1-202ENST00000562747 REM1O75628 298 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 KRT20P35900 424 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 CASP3P42574 277 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 CDK9P50750 372 aaKnown RBP15.17■□□□□ 0.02
CDT1-202ENST00000562747 EFR3AQ14156 821 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 LSM12Q3MHD2 195 aaKnown RBP15.17■□□□□ 0.02
CDT1-202ENST00000562747 CYP27C1Q4G0S4 372 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 TMEM198Q66K66 360 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 Q6ZPB1 254 aaPredicted RBP15.17■□□□□ 0.02
CDT1-202ENST00000562747 SPATA19Q7Z5L4 167 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 SPPL2CQ8IUH8 684 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 TMEM251Q8N6I4 163 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 NUP43Q8NFH3 380 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 LRRC8CQ8TDW0 803 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 OR5P2Q8WZ92 322 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 HOXB13Q92826 284 aaPredicted RBP15.17■□□□□ 0.02
CDT1-202ENST00000562747 NTNG2Q96CW9 530 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 TMCO6Q96DC7 493 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 ZNF597Q96LX8 424 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 C7orf26Q96N11 449 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 COL21A1Q96P44 957 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 DUSP26Q9BV47 211 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 DPY30Q9C005 99 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 Q9N2J8 555 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 QPCTLQ9NXS2 382 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 OR10H1Q9Y4A9 318 aa15.17■□□□□ 0.02
CDT1-202ENST00000562747 EMC8O43402 210 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 TSPAN2O60636 221 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 TRIM3O75382 744 aaPredicted RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 IL12BP29460 328 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 KIR3DL1P43629 444 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 PNLIPRP2P54317 469 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 CASP6P55212 293 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 MRPS22P82650 360 aaKnown RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 PRR5P85299 388 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 SNTA1Q13424 505 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 SLC30A6Q6NXT4 461 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 ZCCHC12Q6PEW1 402 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 PACS2Q86VP3 889 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 CHERPQ8IWX8 916 aaKnown RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 CDRT4Q8N9R6 151 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 PSMA8Q8TAA3 256 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 DYDC1Q8WWB3 177 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 TMEM41AQ96HV5 264 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 MAELQ96JY0 434 aaKnown RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 RILPQ96NA2 401 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 MS4A4EQ96PG1 132 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 NODALQ96S42 347 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 DEFB127Q9H1M4 99 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 ZNF703Q9H7S9 590 aaPredicted RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 METTL7AQ9H8H3 244 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 NEUROD4Q9HD90 331 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 SIRT3Q9NTG7 399 aaPredicted RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 INTS9Q9NV88 658 aaKnown RBP15.16■□□□□ 0.02
CDT1-202ENST00000562747 B4GALT7Q9UBV7 327 aa15.16■□□□□ 0.02
CDT1-202ENST00000562747 SETD2Q9BYW2 2564 aaPredicted RBP15.15■□□□□ 0.02
CDT1-202ENST00000562747 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 LRRC3CA6NJW4 275 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 ANKRD28O15084 1053 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 CDC40O60508 579 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDT1-202ENST00000562747 IGHG3P01860 377 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 ABOP16442 354 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 EFNA1P20827 205 aaPredicted RBP15.15■□□□□ 0.02
CDT1-202ENST00000562747 EPHA3P29320 983 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 MAGEA5P43359 124 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 CLNS1AP54105 237 aaKnown RBP15.15■□□□□ 0.02
CDT1-202ENST00000562747 HSF1Q00613 529 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 SLC10A1Q14973 349 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 DPY19L1Q2PZI1 675 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 VPS26BQ4G0F5 336 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 BICRALQ6AI39 1079 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 ARHGAP11AQ6P4F7 1023 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 XKRXQ6PP77 449 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 OR4N2Q8NGD1 307 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 OR8J2Q8NGG1 315 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 TESCQ96BS2 214 aa15.15■□□□□ 0.02
CDT1-202ENST00000562747 FAM120BQ96EK7 910 aaKnown RBP15.15■□□□□ 0.02
CDT1-202ENST00000562747 GIMAP5Q96F15 307 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms