RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PIRTP0C851 137 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CBSLP0DN79 551 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 TMEM225BP0DP42 221 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 THRAP10827 490 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ANXA8P13928 327 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 GFAPP14136 432 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CD1DP15813 335 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 NCF2P19878 526 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 DGKAP23743 735 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 POU1F1P28069 291 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 OTX2P32243 289 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CD70P32970 193 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CBSP35520 551 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 DGKQP52824 942 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CDH13P55290 713 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 KRTAP10-11P60412 298 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 HERVK_113P63132 956 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ADORA2A-AS1P86434 159 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ZXDBP98169 803 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 SNTB2Q13425 540 aaKnown RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 IHHQ14623 411 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 PTPRCAPQ14761 206 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 HERC3Q15034 1050 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 VWC2Q2TAL6 325 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 TTLL9Q3SXZ7 439 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ACCSLQ4AC99 568 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ARL13AQ5H913 290 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ANXA8L1Q5VT79 327 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 PTRHD1Q6GMV3 140 aaKnown RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 TMEM211Q6ICI0 200 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ZNF425Q6IV72 752 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ARSKQ6UWY0 536 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 MACC1Q6ZN28 852 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 BCDIN3DQ7Z5W3 292 aaKnown RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 CUZD1Q86UP6 607 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CAMK1DQ8IU85 385 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 RYBPQ8N488 228 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 FBXO39Q8N4B4 442 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 WFDC5Q8TCV5 224 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 SMG7Q92540 1137 aaKnown RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ECHDC3Q96DC8 303 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 PHF21BQ96EK2 531 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 C19orf60Q96EN9 201 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 TPD52L3Q96J77 140 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 SLC41A2Q96JW4 573 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 LMLNQ96KR4 655 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 NDNQ99608 321 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 OLFM1Q99784 485 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ERVK-6Q9BXR3 956 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 HDHD5Q9BXW7 423 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 TM6SF2Q9BZW4 377 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 C20orf27Q9GZN8 174 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 NMUR2Q9GZQ4 415 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 SFXN1Q9H9B4 322 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 MRPL40Q9NQ50 206 aaKnown RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 MARCOQ9UEW3 520 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 BCAP29Q9UHQ4 241 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 CRLS1Q9UJA2 301 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 KCNK6Q9Y257 313 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 DHRS7Q9Y394 339 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 ALPK3Q96L96 1907 aa4.81□□□□□ -1.64
SRP54-211ENST00000556445 NUP210Q8TEM1 1887 aaPredicted RBP4.81□□□□□ -1.64
SRP54-211ENST00000556445 GLYATL1P3A0A0U1RQE8 302 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 TSPAN11A1L157 253 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 OR51F1A6NGY5 319 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZNF716A6NP11 495 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SUPT3HB4E1H0 165 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 PSMD11O00231 422 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 RAD51BO15315 384 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 BUD23O43709 281 aaKnown RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 MOSPD3O75425 235 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SUPT3HO75486 399 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 GPC4O75487 556 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CTAG2O75638 210 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 RFPL2O75678 378 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SUPT7LO94864 414 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CBX6O95503 412 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 HOXB5P09067 269 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 LINGO3P0C6S8 592 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 OR56A5P0C7T3 313 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZNF735P0CB33 412 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 T-ENOLP0DO92 83 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ENO3P13929 434 aaPredicted RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 EPCAMP16422 314 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 GJA1P17302 382 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 IGFBP2P18065 325 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 HLA-FP30511 346 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CCR2P41597 374 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 NSG1P42857 185 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 NUMBP49757 651 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 HTR6P50406 440 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 BLKP51451 505 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CCNHP51946 323 aaPredicted RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 CDKN2DP55273 166 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 PKNOX1P55347 436 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CARD18P57730 90 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 DCDC1P59894 354 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SHC2P98077 582 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms