RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ALAS2P22557 587 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 P2RY2P41231 377 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CRYBB2P43320 205 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 MAP2K3P46734 347 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 PRR5P85299 388 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ILKQ13418 452 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ODF4Q2M2E3 257 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ZNF542PQ5EBM4 170 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SLX4IPQ5VYV7 408 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 POMZP3Q6PJE2 187 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SLC36A4Q6YBV0 504 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 OR8H1Q8NGG4 311 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ZNF671Q8TAW3 534 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 AP3S1Q92572 193 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 AMDHD1Q96NU7 426 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CDCA4Q9BXL8 241 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 C3orf14Q9HBI5 128 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 MOV10Q9HCE1 1003 aaKnown RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 MCUBQ9NWR8 336 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 NOTOA8MTQ0 251 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ACVR2AP27037 513 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 BSGP35613 385 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 TRIM23P36406 574 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 IFNGR2P38484 337 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 HTR2BP41595 481 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 MAPK9P45984 424 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CDK3Q00526 305 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 IFITM2Q01629 132 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 MZT2BQ6NZ67 158 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 RPTNQ6XPR3 784 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 RNF44Q7L0R7 432 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 LAS2Q8IYD9 372 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 PGBD3Q8N328 593 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 CPA6Q8N4T0 437 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 FRMD1Q8N878 549 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SLC37A3Q8NCC5 494 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 OR6C4Q8NGE1 309 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 ZNF514Q96K75 400 aaPredicted RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SLC6A18Q96N87 628 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 DCLRE1CQ96SD1 692 aaKnown RBP11.15□□□□□ -0.62
XRCC3-208ENST00000554811 GALNT9Q9HCQ5 603 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 STARD5Q9NSY2 213 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SEMA4GQ9NTN9 838 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 SPHK1Q9NYA1 384 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 GTF2A1LQ9UNN4 478 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 WDR45Q9Y484 360 aa11.15□□□□□ -0.62
XRCC3-208ENST00000554811 C12orf71A8MTZ7 269 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 AKR7A2O43488 359 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 PRKNO60260 465 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 LDB3O75112 727 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 SOX30O94993 753 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 OR5F1O95221 314 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 CSF3P09919 207 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 NAA10P41227 235 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 ANXA11P50995 505 aaKnown RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF79Q15937 498 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF793Q6ZN11 406 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 NANOGP1Q8N7R0 232 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 YIPF7Q8N8F6 280 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 KIAA1958Q8N8K9 716 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 SLC16A11Q8NCK7 471 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 PROKR2Q8NFJ6 384 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 CDS1Q92903 461 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 SDHCQ99643 169 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 SLC7A7Q9UM01 511 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 ANAPC1Q9H1A4 1944 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 PRAMEF27A3QJZ7 478 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 FAM171A2A8MVW0 826 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 AIFM1O95831 613 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 LAMP2P13473 410 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 PCBP3P57721 371 aaKnown RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 DCDC1P59894 354 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 DUSP2Q05923 314 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 HNRNPA1L2Q32P51 320 aaKnown RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 GXYLT1Q4G148 440 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 UBQLNLQ8IYU4 475 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 OR52L1Q8NGH7 329 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 HMGB4Q8WW32 186 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 RASSF5Q8WWW0 418 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 KATNB1Q9BVA0 655 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 CHIAQ9BZP6 476 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 SPRTNQ9H040 489 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 RNF121Q9H920 327 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 REV1Q9UBZ9 1251 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 A4GNTQ9UNA3 340 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 PPIL1Q9Y3C6 166 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 A0A0B4J203 849 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 EDDM13A0A1B0GTR0 161 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 A0A1W2PR48 441 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 HYKKA2RU49 373 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 RASGRP1O95267 797 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 LALBAP00709 142 aa11.14□□□□□ -0.63
XRCC3-208ENST00000554811 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-208ENST00000554811 MPIP34949 423 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms