RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 STMN3Q9NZ72 180 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 EHD3Q9NZN3 535 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 DNAJB9Q9UBS3 223 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 SEC14L3Q9UDX4 400 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF639Q9UID6 485 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 USP22Q9UPT9 525 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 GTF3C1Q12789 2109 aa14.89□□□□□ -0.03
ACTN1-209ENST00000553659 SAP18O00422 153 aaKnown RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 FOXS1O43638 330 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 TPST1O60507 370 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 SERPINA1P01009 418 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 ITGAMP11215 1152 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 PCGF2P35227 344 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 CA7P43166 264 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 TXNL4AP83876 142 aaKnown RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 MLC1Q15049 377 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 PCOLCEQ15113 449 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 ABHD17BQ5VST6 288 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 OR4C11Q6IEV9 310 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF425Q6IV72 752 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 MTFR2Q6P444 385 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 MRGPRGQ86SM5 289 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 ARHGEF39Q8N4T4 335 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF808Q8N4W9 903 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 C11orf65Q8NCR3 313 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 SUN3Q8TAQ9 357 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 CREB3L4Q8TEY5 395 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 RERGQ96A58 199 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 TBC1D20Q96BZ9 403 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 AURKBQ96GD4 344 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 CCDC120Q96HB5 630 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 IMMP1LQ96LU5 166 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 F2RL3Q96RI0 385 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF717Q9BY31 904 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 CHST11Q9NPF2 352 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 MKL2Q9ULH7 1088 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 EXO1Q9UQ84 846 aaKnown RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 PKDREJQ9NTG1 2253 aa14.88□□□□□ -0.03
ACTN1-209ENST00000553659 TEP1Q99973 2627 aaKnown RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 NCOA6Q14686 2063 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-209ENST00000553659 APCP25054 2843 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 A0A0A6YYC8 382 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 FEZF1A0PJY2 475 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 LRIT2A6NDA9 550 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 OR5H15A6NDH6 313 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 SAC3D1A6NKF1 404 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 I3L1I5 382 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 PDPK1O15530 556 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 PRAMEF2O60811 474 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 TNFAIP8O95379 198 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 IFNA14P01570 189 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 FAM58BPP0C7Q3 252 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 UQCRC2P22695 453 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 PTGER4P35408 488 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 SSR2P43308 183 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 FAM53BQ14153 422 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 RGNQ15493 299 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 SYT16Q17RD7 645 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF385BQ569K4 471 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 ANKRD26P1Q6NSI1 321 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 RPTNQ6XPR3 784 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 ZC3H7AQ8IWR0 971 aaKnown RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 ZCCHC7Q8N3Z6 543 aaKnown RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 CBR4Q8N4T8 237 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 FBXO30Q8TB52 745 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 TM4SF18Q96CE8 201 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 ZBED6CLQ96FA7 236 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 KCNC2Q96PR1 638 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 SLC35A5Q9BS91 424 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 TMEM38AQ9H6F2 299 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 ACSS1Q9NUB1 689 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 THUMPD1Q9NXG2 353 aaKnown RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 TAS2R7Q9NYW3 318 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 OAZ3Q9UMX2 235 aa14.87□□□□□ -0.03
ACTN1-209ENST00000553659 FAF1Q9UNN5 650 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-209ENST00000553659 A0A0A6YYD5 115 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 URADA6NGE7 173 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 PRKD3O94806 890 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 C6orf47O95873 294 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 TBX6O95947 436 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-209ENST00000553659 C8orf89P0DMQ9 161 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF23P17027 643 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 KDELR2P33947 212 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 CHI3L1P36222 383 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-209ENST00000553659 BCL6P41182 706 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 MAGEA2P43356 314 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 RBPJQ06330 500 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 RGS1Q08116 209 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 NRF1Q16656 503 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 NDUFA9Q16795 377 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 ZNF630Q2M218 657 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-209ENST00000553659 GCNT6Q5T4J0 391 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 UGT2A3Q6UWM9 527 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 CBLL1Q75N03 491 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 EIF3MQ7L2H7 374 aaKnown RBP14.86□□□□□ -0.03
ACTN1-209ENST00000553659 ZDHHC13Q8IUH4 622 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 ZFP28Q8NHY6 868 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 METTL21AQ8WXB1 218 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 ANKRD60Q9BZ19 345 aa14.86□□□□□ -0.03
ACTN1-209ENST00000553659 SLC6A16Q9GZN6 736 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms