RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CNOT11Q9UKZ1 510 aaKnown RBP8.83□□□□□ -1
CHFR-220ENST00000541817 MAPRE3Q9UPY8 281 aa8.83□□□□□ -1
CHFR-220ENST00000541817 CLCA3PQ9Y6N3 262 aa8.83□□□□□ -1
CHFR-220ENST00000541817 PRR14LQ5THK1 2151 aa8.82□□□□□ -1
CHFR-220ENST00000541817 A0A088AWK7 358 aa8.82□□□□□ -1
CHFR-220ENST00000541817 LOC100653049A0A140TA62 436 aa8.82□□□□□ -1
CHFR-220ENST00000541817 LRRC14BA6NHZ5 514 aa8.82□□□□□ -1
CHFR-220ENST00000541817 ZNF839A8K0R7 811 aa8.82□□□□□ -1
CHFR-220ENST00000541817 E9PBE3 544 aa8.82□□□□□ -1
CHFR-220ENST00000541817 MSTNO14793 375 aa8.82□□□□□ -1
CHFR-220ENST00000541817 DLX3O60479 287 aa8.82□□□□□ -1
CHFR-220ENST00000541817 KRT34O76011 436 aa8.82□□□□□ -1
CHFR-220ENST00000541817 TGM6O95932 706 aa8.82□□□□□ -1
CHFR-220ENST00000541817 PIK3R1P27986 724 aa8.82□□□□□ -1
CHFR-220ENST00000541817 ARRB2P32121 409 aa8.82□□□□□ -1
CHFR-220ENST00000541817 HSD17B2P37059 387 aa8.82□□□□□ -1
CHFR-220ENST00000541817 STARP49675 285 aa8.82□□□□□ -1
CHFR-220ENST00000541817 CDK9P50750 372 aaKnown RBP8.82□□□□□ -1
CHFR-220ENST00000541817 TAS2R39P59534 338 aa8.82□□□□□ -1
CHFR-220ENST00000541817 TBL3Q12788 808 aaKnown RBP8.82□□□□□ -1
CHFR-220ENST00000541817 BLMHQ13867 455 aa8.82□□□□□ -1
CHFR-220ENST00000541817 GBX1Q14549 363 aa8.82□□□□□ -1
CHFR-220ENST00000541817 ARL13AQ5H913 290 aaPredicted RBP8.82□□□□□ -1
CHFR-220ENST00000541817 BEX5Q5H9J7 111 aa8.82□□□□□ -1
CHFR-220ENST00000541817 FAM45BPQ6NSW5 357 aa8.82□□□□□ -1
CHFR-220ENST00000541817 TMEM64Q6YI46 380 aa8.82□□□□□ -1
CHFR-220ENST00000541817 MBOAT1Q6ZNC8 495 aa8.82□□□□□ -1
CHFR-220ENST00000541817 PIWIL4Q7Z3Z4 852 aaKnown RBP8.82□□□□□ -1
CHFR-220ENST00000541817 DEFB107AQ8IZN7 70 aa8.82□□□□□ -1
CHFR-220ENST00000541817 CENPLQ8N0S6 344 aaPredicted RBP8.82□□□□□ -1
CHFR-220ENST00000541817 TMEM132CQ8N3T6 1108 aa8.82□□□□□ -1
CHFR-220ENST00000541817 ZNF610Q8N9Z0 462 aa8.82□□□□□ -1
CHFR-220ENST00000541817 FAM45AQ8TCE6 357 aa8.82□□□□□ -1
CHFR-220ENST00000541817 ZPLD1Q8TCW7 415 aa8.82□□□□□ -1
CHFR-220ENST00000541817 AGR3Q8TD06 166 aa8.82□□□□□ -1
CHFR-220ENST00000541817 PTPMT1Q8WUK0 201 aaPredicted RBP8.82□□□□□ -1
CHFR-220ENST00000541817 PYCR2Q96C36 320 aa8.82□□□□□ -1
CHFR-220ENST00000541817 CLPTM1LQ96KA5 538 aa8.82□□□□□ -1
CHFR-220ENST00000541817 ZNF597Q96LX8 424 aa8.82□□□□□ -1
CHFR-220ENST00000541817 TM9SF2Q99805 663 aa8.82□□□□□ -1
CHFR-220ENST00000541817 G6PC3Q9BUM1 346 aa8.82□□□□□ -1
CHFR-220ENST00000541817 AICDAQ9GZX7 198 aa8.82□□□□□ -1
CHFR-220ENST00000541817 SPNS1Q9H2V7 528 aa8.82□□□□□ -1
CHFR-220ENST00000541817 VCXQ9H320 206 aa8.82□□□□□ -1
CHFR-220ENST00000541817 S100A14Q9HCY8 104 aa8.82□□□□□ -1
CHFR-220ENST00000541817 CCDC177Q9NQR7 707 aaPredicted RBP8.82□□□□□ -1
CHFR-220ENST00000541817 SLC7A8Q9UHI5 535 aa8.82□□□□□ -1
CHFR-220ENST00000541817 PRPF19Q9UMS4 504 aaKnown RBP8.82□□□□□ -1
CHFR-220ENST00000541817 LRCH1Q9Y2L9 728 aa8.82□□□□□ -1
CHFR-220ENST00000541817 MMACHCQ9Y4U1 282 aa8.82□□□□□ -1
CHFR-220ENST00000541817 CHCHD2Q9Y6H1 151 aaPredicted RBP8.82□□□□□ -1
CHFR-220ENST00000541817 CD3EAPO15446 510 aaKnown RBP8.81□□□□□ -1
CHFR-220ENST00000541817 SMIM24O75264 130 aa8.81□□□□□ -1
CHFR-220ENST00000541817 TRIM3O75382 744 aaPredicted RBP8.81□□□□□ -1
CHFR-220ENST00000541817 NDUFS3O75489 264 aa8.81□□□□□ -1
CHFR-220ENST00000541817 VENTXO95231 258 aa8.81□□□□□ -1
CHFR-220ENST00000541817 ETHE1O95571 254 aa8.81□□□□□ -1
CHFR-220ENST00000541817 HPNP05981 417 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CHRNGP07510 517 aa8.81□□□□□ -1
CHFR-220ENST00000541817 DANCRP0C864 163 aa8.81□□□□□ -1
CHFR-220ENST00000541817 TNNI3P19429 210 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CHRM3P20309 590 aa8.81□□□□□ -1
CHFR-220ENST00000541817 HRH2P25021 359 aa8.81□□□□□ -1
CHFR-220ENST00000541817 ARNTP27540 789 aa8.81□□□□□ -1
CHFR-220ENST00000541817 PPARGP37231 505 aaPredicted RBP8.81□□□□□ -1
CHFR-220ENST00000541817 BTN3A2P78410 334 aa8.81□□□□□ -1
CHFR-220ENST00000541817 ID2Q02363 134 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CYLC2Q14093 348 aaPredicted RBP8.81□□□□□ -1
CHFR-220ENST00000541817 CSHL1Q14406 222 aa8.81□□□□□ -1
CHFR-220ENST00000541817 ACAP2Q15057 778 aa8.81□□□□□ -1
CHFR-220ENST00000541817 MAPRE2Q15555 327 aa8.81□□□□□ -1
CHFR-220ENST00000541817 PHKG1Q16816 387 aa8.81□□□□□ -1
CHFR-220ENST00000541817 EXOC3L2Q2M3D2 409 aa8.81□□□□□ -1
CHFR-220ENST00000541817 LSM12Q3MHD2 195 aaKnown RBP8.81□□□□□ -1
CHFR-220ENST00000541817 TOR1AIP1Q5JTV8 583 aa8.81□□□□□ -1
CHFR-220ENST00000541817 PGM2L1Q6PCE3 622 aa8.81□□□□□ -1
CHFR-220ENST00000541817 SBSNQ6UWP8 590 aa8.81□□□□□ -1
CHFR-220ENST00000541817 SDCCAG8Q86SQ7 713 aaPredicted RBP8.81□□□□□ -1
CHFR-220ENST00000541817 C17orf64Q86WR6 236 aa8.81□□□□□ -1
CHFR-220ENST00000541817 GRAMD2AQ8IUY3 354 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CEP70Q8NHQ1 597 aa8.81□□□□□ -1
CHFR-220ENST00000541817 SLC2A12Q8TD20 617 aa8.81□□□□□ -1
CHFR-220ENST00000541817 PEX13Q92968 403 aa8.81□□□□□ -1
CHFR-220ENST00000541817 WNT2BQ93097 391 aa8.81□□□□□ -1
CHFR-220ENST00000541817 SPACA9Q96E40 222 aaPredicted RBP8.81□□□□□ -1
CHFR-220ENST00000541817 GPR78Q96P69 363 aa8.81□□□□□ -1
CHFR-220ENST00000541817 OR52B2Q96RD2 323 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CSF3RQ99062 836 aa8.81□□□□□ -1
CHFR-220ENST00000541817 NTMT1Q9BV86 223 aa8.81□□□□□ -1
CHFR-220ENST00000541817 NUF2Q9BZD4 464 aa8.81□□□□□ -1
CHFR-220ENST00000541817 EFCAB1Q9HAE3 211 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CLCF1Q9UBD9 225 aa8.81□□□□□ -1
CHFR-220ENST00000541817 ZDHHC2Q9UIJ5 367 aa8.81□□□□□ -1
CHFR-220ENST00000541817 RIMKLBQ9ULI2 386 aa8.81□□□□□ -1
CHFR-220ENST00000541817 KCNS2Q9ULS6 477 aa8.81□□□□□ -1
CHFR-220ENST00000541817 CORO1CQ9ULV4 474 aaPredicted RBP8.81□□□□□ -1
CHFR-220ENST00000541817 VWA7Q9Y334 891 aa8.81□□□□□ -1
CHFR-220ENST00000541817 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
CHFR-220ENST00000541817 FRG2CA6NGY1 282 aa8.8□□□□□ -1
CHFR-220ENST00000541817 GNB5O14775 395 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms