RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CCT7Q99832 543 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 GPATCH1Q9BRR8 931 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 YIPF4Q9BSR8 244 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SORBS1Q9BX66 1292 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 EBPLQ9BY08 206 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 MS4A8Q9BY19 250 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 MRPL1Q9BYD6 325 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 AMBRA1Q9C0C7 1298 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SLC7A5P2Q9GIP4 190 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PITHD1Q9GZP4 211 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 KLHL31Q9H511 634 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ACTR5Q9H9F9 607 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 BRF2Q9HAW0 419 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 LRTM1Q9HBL6 345 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RASSF1Q9NS23 344 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ARL8BQ9NVJ2 186 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RIC8BQ9NVN3 520 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 AIG1Q9NVV5 245 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 BEX4Q9NWD9 120 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 C1orf109Q9NX04 203 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ZFP69BQ9UJL9 534 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SLC12A4Q9UP95 1085 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 DLGAP4Q9Y2H0 992 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PTRH2Q9Y3E5 179 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 POLR3HQ9Y535 204 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 GPR45Q9Y5Y3 372 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 HEATR5AQ86XA9 2040 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 A0A0G2JN53 185 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 A0A0J9YVX5 310 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 TCRBV5S2A0A599 114 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ERICH4A6NGS2 130 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 H0YGG7 62 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 H3BMH7 237 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 FBP2O00757 339 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 KLF4O43474 513 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 TMPRSS11DO60235 418 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CCDC22O60826 627 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 DNAJB6O75190 326 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 SEC22BO75396 215 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 EEDO75530 441 aaKnown RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 DCTN3O75935 186 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 TOXO94900 526 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 FKBP9O95302 570 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ZBTB11O95625 1053 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 GBAP04062 536 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 SMIM10L1P0DMW3 83 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 BCKDHAP12694 445 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ABOP16442 354 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 SDC1P18827 310 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CDH3P22223 829 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 HRH2P25021 359 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CXCR2P25025 360 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 BSGP35613 385 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 AHRP35869 848 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 PEX19P40855 299 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 PIK3CBP42338 1070 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CPA2P48052 419 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ATP4BP51164 291 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ARF3P61204 181 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 UFM1P61960 85 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 DCAF7P61962 342 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 BNIP1Q12981 228 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 SQLEQ14534 574 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 KRT72Q14CN4 511 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 NAA25Q14CX7 972 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ZSCAN26Q16670 478 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 HIST2H2ACQ16777 129 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 IMPG1Q17R60 797 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ADPRMQ3LIE5 342 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ATP6AP1LQ52LC2 224 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 PDCD4Q53EL6 469 aaKnown RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 TOR1AIP1Q5JTV8 583 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 DEPDC1Q5TB30 811 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 IL23RQ5VWK5 629 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 KHDRBS2Q5VWX1 349 aaKnown RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 STEAP3Q658P3 488 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 HIST2H2AA3Q6FI13 130 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 LCN10Q6JVE6 187 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ARMC6Q6NXE6 501 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 NOXRED1Q6NXP6 359 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CYP20A1Q6UW02 462 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 LINC00696Q6ZRV3 163 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 COMMD6Q7Z4G1 85 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 SPATA19Q7Z5L4 167 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CDC20BQ86Y33 519 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 P3H2Q8IVL5 708 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 METTL4Q8N3J2 472 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 LIX1Q8N485 282 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 C1orf52Q8N6N3 182 aaKnown RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 GBP7Q8N8V2 638 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 FNDC5Q8NAU1 212 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CATSPER1Q8NEC5 780 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 CLHC1Q8NHS4 586 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 NT5CQ8TCD5 201 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 UCN3Q969E3 161 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 KISS1RQ969F8 398 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-206ENST00000441089 UBE2E3Q969T4 207 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ZUFSPQ96AP4 578 aa4.43□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF501Q96CX3 271 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms