RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 SELENOMQ8WWX9 145 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 EXOSC8Q96B26 276 aaKnown RBP7.31□□□□□ -1.24
VIM-202ENST00000421459 TMCO6Q96DC7 493 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 CCL19Q99731 98 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 MED18Q9BUE0 208 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 NTMT1Q9BV86 223 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 KLHL4Q9C0H6 718 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 ELOVL6Q9H5J4 265 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 FOLH1BQ9HBA9 442 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 AHSPQ9NZD4 102 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 XPR1Q9UBH6 696 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 ADAM29Q9UKF5 820 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 UTS2RQ9UKP6 389 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 TNPO3Q9Y5L0 923 aaKnown RBP7.31□□□□□ -1.24
VIM-202ENST00000421459 MED12Q93074 2177 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 NSD1Q96L73 2696 aaPredicted RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 SLC22A20A6NK97 555 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 CDH16O75309 829 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 GOSR1O95249 250 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 CNOT4O95628 575 aaKnown RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 ESRRBO95718 433 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 OPN1LWP04000 364 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 POU2F1P14859 743 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 HK1P19367 917 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 CRYGSP22914 178 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 CHMP24386 653 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 IL12BP29460 328 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 KCNJ5P48544 419 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 SERPINB8P50452 374 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 NAB1Q13506 487 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 EXOC3L2Q2M3D2 409 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 SH2D4BQ5SQS7 431 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 RAET1LQ5VY80 246 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 KLC3Q6P597 504 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 SCIMPQ6UWF3 145 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 MARCH3Q86UD3 253 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 LRRC75A-AS1Q8N1F1 130 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 C17orf53Q8N3J3 647 aaPredicted RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 OR2M3Q8NG83 312 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 OR4K17Q8NGC6 315 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 UHMK1Q8TAS1 419 aaKnown RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 FNDC9Q8TBE3 224 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 ZNF483Q8TF39 744 aaPredicted RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 RNF138Q8WVD3 245 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 PIGTQ969N2 578 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 TRIM44Q96DX7 344 aaPredicted RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 SLC35A4Q96G79 324 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 APIPQ96GX9 242 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 VSTM2LQ96N03 204 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 ZFP3Q96NJ6 502 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 BTBD9Q96Q07 612 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 NPAS1Q99742 590 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 PIP5K1AQ99755 562 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 PINK1Q9BXM7 581 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 RYDENQ9NUL5 291 aaKnown RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 NINJ2Q9NZG7 142 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 PRODH2Q9UF12 536 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 TRPS1Q9UHF7 1281 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 CLEC4AQ9UMR7 237 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 CFL2Q9Y281 166 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 DLGAP4Q9Y2H0 992 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 UTP11Q9Y3A2 253 aaKnown RBP7.3□□□□□ -1.24
VIM-202ENST00000421459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.3□□□□□ -1.243e-10■□□□□ 9.5
VIM-202ENST00000421459 ZNF780BQ9Y6R6 833 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 FREM3P0C091 2139 aa7.3□□□□□ -1.24
VIM-202ENST00000421459 MPDZO75970 2070 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 A8MT66 165 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 H3BML4 177 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 C16orf97H3BN30 126 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 STX16-NPEPL1H3BU86 382 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 MANBAO00462 879 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 STX16O14662 325 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 KLF4O43474 513 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 SMIM24O75264 130 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 AQP8O94778 261 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 NTN1O95631 604 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 RPS17P08708 135 aaKnown RBP7.29□□□□□ -1.24
VIM-202ENST00000421459 SLC6A8P48029 635 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 RFX3P48380 749 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 PTH2RP49190 550 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 HTR6P50406 440 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 DSCR4P56555 118 aaPredicted RBP7.29□□□□□ -1.24
VIM-202ENST00000421459 BTKQ06187 659 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 CAPRIN1Q14444 709 aaKnown RBP7.29□□□□□ -1.24
VIM-202ENST00000421459 PON3Q15166 354 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 GGTA1PQ4G0N0 100 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 TEX35Q5T0J7 233 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 ALKBH2Q6NS38 261 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 PPP4R4Q6NUP7 873 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 CHMP1BQ7LBR1 199 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 TMEM151AQ8N4L1 468 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 CDYL2Q8N8U2 506 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 FADS6Q8N9I5 356 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 C16orf78Q8WTQ4 265 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 DUSP19Q8WTR2 217 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 MTBPQ96DY7 904 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 KLHDC3Q9BQ90 382 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 EBPLQ9BY08 206 aa7.29□□□□□ -1.24
VIM-202ENST00000421459 ACBD3Q9H3P7 528 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms