RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 IL31RAQ8NI17 732 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 FBXO7Q9Y3I1 522 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 AKAP12Q02952 1782 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 TOX4O94842 621 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 POLR2CP19387 275 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 ABHD18Q0P651 414 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 LANCL3Q6ZV70 420 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 GINS3Q9BRX5 216 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 KLHL42Q9P2K6 505 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 RPS10-NUDT3A0A1W2PQS6 291 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 C2CD4BA6NLJ0 364 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 NPC1O15118 1278 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 KLRC4O43908 158 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 CD79AP11912 226 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 RPS10P46783 165 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 APOBEC3HQ6NTF7 200 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 PAPD5Q8NDF8 572 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 CHDHQ8NE62 594 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 SORCS1Q8WY21 1168 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 OR1E3Q8WZA6 343 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 ACDQ96AP0 544 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 FKBP10Q96AY3 582 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 HRH4Q9H3N8 390 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 ARSFP54793 590 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 SFT2D3Q587I9 215 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 ZNF585AQ6P3V2 769 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 LEG1Q6P5S2 330 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 LIN7CQ9NUP9 197 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 SEC14L5O43304 696 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 GABRR1P24046 479 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 SGSHP51688 502 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 FBXW12Q6X9E4 464 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 DOHHQ9BU89 302 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 CACNG6Q9BXT2 260 aa16.5■□□□□ 0.23
CACNA1A-201ENST00000360228 ZNF701M0R085 212 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 YY2O15391 372 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 APLNRP35414 380 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 RALGAPA1Q6GYQ0 2036 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 ZNF207O43670 478 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 ALDOBP05062 364 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 RNF111Q6ZNA4 994 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 LRR1Q96L50 414 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 FOXN2P32314 431 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 MEF2AQ02078 507 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 KIAA0319Q5VV43 1072 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 ZBTB20Q9HC78 741 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 UPK3BL1B0FP48 263 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 UPK3BL2E5RIL1 263 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 KRTCAP2Q8N6L1 136 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 PTCHD1Q96NR3 888 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 KCNK6Q9Y257 313 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 POMT1Q9Y6A1 747 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 CD300LBA8K4G0 201 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 PHYHO14832 338 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 FNDC9Q8TBE3 224 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 NPRL2Q8WTW4 380 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 ELMOD3Q96FG2 381 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 CXXC1Q9P0U4 656 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 NLKQ9UBE8 527 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 SLC22A31A6NKX4 558 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 DVL2O14641 736 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 SEC14L2O76054 403 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 PABPC4LP0CB38 370 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 DEFB115Q30KQ5 88 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 ZNF776Q68DI1 518 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 OR9A4Q8NGU2 314 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 MUS81Q96NY9 551 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 SMIM3Q9BZL3 60 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 TGIF2Q9GZN2 237 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 CLDND1Q9NY35 253 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 A0A1W2PQL4 384 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 YJEFN3A6XGL0 299 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 ANKRD66B4E2M5 251 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 SOX3P41225 446 aa16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 PDLIM3Q53GG5 364 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 RPS27LQ71UM5 84 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 MKRN2Q9H000 416 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-201ENST00000360228 MEIS3P1A6NDR6 274 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 ACOT7O00154 380 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 F2RP25116 425 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 PAX6P26367 422 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 DPY19L2P1Q6NXN4 242 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 CMIPQ8IY22 773 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 OR11A1Q9GZK7 315 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 OR6C2Q9NZP2 312 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 SLC6A5Q9Y345 797 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 ZNF736B4DX44 427 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 SLC31A2O15432 143 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 ONECUT3O60422 494 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 RHCEP18577 417 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 RPL11P62913 178 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 LCN10Q6JVE6 187 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 CD163Q86VB7 1156 aa16.48■□□□□ 0.23
CACNA1A-201ENST00000360228 FAM58AQ8N1B3 248 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms