RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SYT7O43581 403 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 ARHGEF15O94989 841 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 LCATP04180 440 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SOX3P41225 446 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 TNFRSF4P43489 277 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 MOGSQ13724 837 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 CCDC58Q4VC31 144 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 GPR26Q8NDV2 337 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SPTSSAQ969W0 71 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 TREX2Q9BQ50 279 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-202ENST00000355480 GPR83Q9NYM4 423 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 MRPL15Q9P015 296 aaKnown RBP17.07■□□□□ 0.32
COL18A1-202ENST00000355480 CD79AP11912 226 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF252P-AS1Q0IIN9 211 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 C6orf132Q5T0Z8 1188 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 UBE2UQ5VVX9 321 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 FCRLBQ6BAA4 426 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 LCTLQ6UWM7 567 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 RBM12BQ8IXT5 1001 aaKnown RBP17.07■□□□□ 0.32
COL18A1-202ENST00000355480 MS4A15Q8N5U1 240 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 OR5AK2Q8NH90 309 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 COQ8AQ8NI60 647 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 FKBP10Q96AY3 582 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 SAMD8Q96LT4 415 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 ADAMTS6Q9UKP5 1117 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 MAB21L2Q9Y586 359 aa17.07■□□□□ 0.32
COL18A1-202ENST00000355480 ZCWPW2A0A1B0GU75 182 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 OTOL1A6NHN0 477 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-202ENST00000355480 SSX5O60225 188 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 AKR1C2P52895 323 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 EPHA4P54764 986 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 KIR2DS3Q14952 304 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 LETMD1Q6P1Q0 360 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 C3P1Q6ZMU1 363 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 CLEC1AQ8NC01 280 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 C16orf58Q96GQ5 468 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 KLF16Q9BXK1 252 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-202ENST00000355480 DPH1Q9BZG8 443 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 MAP2K3P46734 347 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 COQ5Q5HYK3 327 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 IQCF1Q8N6M8 205 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 OR51L1Q8NGJ5 315 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 MBLAC1A4D2B0 266 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-202ENST00000355480 LRRTM2O43300 516 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 PEX14O75381 377 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 AKR1C4P17516 323 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 LSSP48449 732 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 SF3B4Q15427 424 aaKnown RBP eCLIP17.06■□□□□ 0.323e-7■■■■■ 27.8
COL18A1-202ENST00000355480 ZNF791Q3KP31 576 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF619Q8N2I2 560 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 VWA5B2Q8N398 1253 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 ENDOVQ8N8Q3 282 aaKnown RBP17.06■□□□□ 0.32
COL18A1-202ENST00000355480 OR9K2Q8NGE7 335 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 POLE4Q9NR33 117 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 ENPP4Q9Y6X5 453 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 FAM171A2A8MVW0 826 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 UGDHO60701 494 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 NDUFB2O95178 105 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 H2AFB2P0C5Z0 115 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 MAOBP27338 520 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 PRPS1P60891 318 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 CDK3Q00526 305 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 TBRG1Q3YBR2 411 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 DMRT3Q9NQL9 472 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 PRKYO43930 277 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 SLC2A5P22732 501 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 TUBB3Q13509 450 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 TMEM205Q6UW68 189 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 LIPIQ6XZB0 460 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 OR52E1Q8NGJ3 308 aa17.06■□□□□ 0.32
COL18A1-202ENST00000355480 M0R3H8 397 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 DNAJB5O75953 348 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 HTR3BO95264 441 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 SLC6A8P48029 635 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 MELKQ14680 651 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 COL28A1Q2UY09 1125 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF789Q5FWF6 425 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 LGALS12Q96DT0 336 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 METTL2AQ96IZ6 378 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 NAALAD2Q9Y3Q0 740 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 DNAJC25-GNG10A0A024R161 153 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 KIR2DS5A0A0G2JLQ3 304 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 A0A0G2JNG1 304 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 SLC9B1P1A6NJY1 282 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 KIR2DS3K7RE56 304 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 ONECUT3O60422 494 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 APLNRP35414 380 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PRKXP51817 358 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 SNTB2Q13425 540 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 KIR2DS5Q14953 304 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 RNASE10Q5GAN6 216 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PARS2Q7L3T8 475 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 TAS1R1Q7RTX1 841 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 NETO1Q8TDF5 533 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 TP63Q9H3D4 680 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 CD40LGP29965 261 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF33BQ06732 778 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 MAP4K2Q12851 820 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 EIF2B1Q14232 305 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 GTDC1Q4AE62 458 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms