RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ATAT1Q5SQI0 421 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 LIPNQ5VXI9 398 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 KIAA0930Q6ICG6 404 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 NHLRC1Q6VVB1 395 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 TSEN54Q7Z6J9 526 aaKnown RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 OR6K3Q8NGY3 331 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 GPBAR1Q8TDU6 330 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 ACOT11Q8WXI4 607 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 CHFRQ96EP1 664 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 OR2A7Q96R45 310 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 PIGQQ9BRB3 760 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 TWSG1Q9GZX9 223 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 SLC38A1Q9H2H9 487 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 CARHSP1Q9Y2V2 147 aaKnown RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 A0A0G2JLL6 359 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 RFPL4AA6NLU0 287 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 SUPT3HB4E1H0 165 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 RFPL4AL1F8VTS6 287 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 OR2T1O43869 369 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 MPZL2O60487 215 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 MT-ND4P03905 459 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 THP07101 528 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 RAB4AP20338 218 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 MPGP29372 298 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 DGKEP52429 567 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 MAT1AQ00266 395 aaKnown RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 RBBP7Q16576 425 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 INTS6LQ5JSJ4 861 aaKnown RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 MEDAGQ5VYS4 303 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 DOK6Q6PKX4 331 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 IL27RAQ6UWB1 636 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 NPSR1Q6W5P4 371 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 PRRT2Q7Z6L0 340 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 SPICQ8N5J4 248 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 CCDC54Q8NEL0 328 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 DBF4BQ8NFT6 615 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 RHEBL1Q8TAI7 183 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 OSMRQ99650 979 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF559Q9BR84 538 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 C20orf85Q9H1P6 137 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 SUV39H2Q9H5I1 410 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF302Q9NR11 478 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 DUSP22Q9NRW4 184 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 NRBP2Q9NSY0 501 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 FXYD6-FXYD2A0A087WZ82 144 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 C5orf58C9J3I9 102 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 RTCAO00442 366 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 DCLK1O15075 740 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TOX3O15405 576 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 PIP5K1CO60331 668 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 B3GALT4O96024 378 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 HMBSP08397 361 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ELNP15502 786 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ABOP16442 354 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 PTPN6P29350 595 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 NOS3P29474 1203 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 RFX3P48380 749 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 PSMA6P60900 246 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TIAL1Q01085 375 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 MAD2L1Q13257 205 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SLC5A12Q1EHB4 618 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SOWAHAQ2M3V2 549 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ALG11Q2TAA5 492 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 NCMAPQ5T1S8 102 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 KDELC2Q7Z4H8 507 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 BCDIN3DQ7Z5W3 292 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 OR9Q2Q8NGE9 314 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 OR52B6Q8NGF0 335 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 OR5M3Q8NGP4 307 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 OR5J2Q8NH18 312 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 POC1BQ8TC44 478 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 GCDHQ92947 438 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 S100PBPQ96BU1 408 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SLC6A18Q96N87 628 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TBL1YQ9BQ87 522 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 INPP5KQ9BT40 448 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 PBX4Q9BYU1 374 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 FXYD6Q9H0Q3 95 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 R3HDMLQ9H3Y0 253 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 KLHL31Q9H511 634 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 WDR26Q9H7D7 661 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SERHLQ9NQF3 203 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ACSS1Q9NUB1 689 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 MED16Q9Y2X0 877 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 AAR2Q9Y312 384 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TMEM189-UBE2V1I3L0A0 370 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SLC28A2O43868 658 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 C6orf47O95873 294 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 F2P00734 622 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 EIF4EP06730 217 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 HIST1H1BP16401 226 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TMEM11P17152 192 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ACHEP22303 614 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ETV5P41161 510 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 CHRNA4P43681 627 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ANXA11P50995 505 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 FAM189BP81408 668 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 DHCR24Q15392 516 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms