RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PRRT3Q5FWE3 981 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 IQCHQ86VS3 1027 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 CLIP4Q8N3C7 705 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 FAM26EQ8N5C1 309 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 GPA33Q99795 319 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 QRSL1Q9H0R6 528 aaKnown RBP20.53■□□□□ 0.88
RNF39-201ENST00000244360 HYKKA2RU49 373 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 SLC35F4A4IF30 521 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 ALPPP05187 535 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 ACADMP11310 421 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 TNNI3P19429 210 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 CHRNEQ04844 493 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 TCEA2Q15560 299 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 ZNF311Q5JNZ3 666 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 HEPHL1Q6MZM0 1159 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 FGF11Q92914 225 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 EQTNQ9NQ60 294 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 PRDM9Q9NQV7 894 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 PHF11Q9UIL8 331 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 SSR3Q9UNL2 185 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 MYL12BO14950 172 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 UGT2B7P16662 529 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 GSTM3P21266 225 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 DRD1P21728 446 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 EFNB1P98172 346 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 CDK5Q00535 292 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 DGLUCYQ7Z3D6 616 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 SAMD14Q8IZD0 417 aaPredicted RBP20.52■□□□□ 0.88
RNF39-201ENST00000244360 GJD3Q8N144 294 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 LRRC25Q8N386 305 aaPredicted RBP20.52■□□□□ 0.88
RNF39-201ENST00000244360 TCEANCQ8N8B7 351 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 KAT2AQ92830 837 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 SERINC2Q96SA4 455 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 TSSK6Q9BXA6 273 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 ANKRA2Q9H9E1 313 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 POLMQ9NP87 494 aaPredicted RBP20.52■□□□□ 0.88
RNF39-201ENST00000244360 CHST2Q9Y4C5 530 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 PCDHGB2Q9Y5G2 931 aa20.52■□□□□ 0.88
RNF39-201ENST00000244360 IQCMA0A1B0GVH7 501 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 P2RX6O15547 441 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 TPST2O60704 377 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 CTSVO60911 334 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 NDUFV2P19404 249 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 MAGP20916 626 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 RPS19P39019 145 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 CRYBB2P43320 205 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 LSM11P83369 360 aaKnown RBP eCLIP20.51■□□□□ 0.87
RNF39-201ENST00000244360 KIAA1324Q6UXG2 1013 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 MS4A4EQ96PG1 132 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 POLR2J2Q9GZM3 115 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 MIR1-1HGQ9H1L0 117 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 PILRAQ9UKJ1 303 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 GOLGA4Q13439 2230 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 ZIC2O95409 532 aaPredicted RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 KRT8P05787 483 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 PRKAR1BP31321 381 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 SOX3P41225 446 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 GIPRP48546 466 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 SRP54P61011 504 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 SUZ12Q15022 739 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 CARTPTQ16568 116 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 ALG11Q2TAA5 492 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 FCRL6Q6DN72 434 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 MFSD12Q6NUT3 480 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 TMPRSS11AQ6ZMR5 421 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 OR8H2Q8N162 312 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 IQCF1Q8N6M8 205 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 OR7G2Q8NG99 324 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 DIO2Q92813 273 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 ZNF486Q96H40 463 aaPredicted RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 ANKRD19PQ9H560 264 aa20.51■□□□□ 0.87
RNF39-201ENST00000244360 DIMT1Q9UNQ2 313 aaKnown RBP20.51■□□□□ 0.87
RNF39-201ENST00000244360 C10orf142B7Z368 130 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 RGS5O15539 181 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 PRKYO43930 277 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 CCNKO75909 580 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 RASGRP1O95267 797 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 CKMT1AP12532 417 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 S100A1P23297 94 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 OR2B6P58173 313 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 YPEL5P62699 121 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 GINS1Q14691 196 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 FAM214AQ32MH5 1076 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 FAM111BQ6SJ93 734 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 C16orf62Q7Z3J2 963 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 VRK2Q86Y07 508 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 ZG16BQ96DA0 208 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 SLC35A4Q96G79 324 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 C6orf106Q9H6K1 298 aaPredicted RBP20.5■□□□□ 0.87
RNF39-201ENST00000244360 ERVK13-1Q9NX77 482 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 TVP23BQ9NYZ1 205 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 CLEC2DQ9UHP7 191 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 GPR55Q9Y2T6 319 aaPredicted RBP20.5■□□□□ 0.87
RNF39-201ENST00000244360 PIAS3Q9Y6X2 628 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 A0A087WUU8 490 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 IRGMA1A4Y4 181 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 DUXAA6NLW8 204 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 H3BQ06 376 aaPredicted RBP20.5■□□□□ 0.87
RNF39-201ENST00000244360 CPN2P22792 545 aa20.5■□□□□ 0.87
RNF39-201ENST00000244360 TPMTP51580 245 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms