RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LTB4RQ15722 352 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 EIF2S3LQ2VIR3 472 aaKnown RBP11.18□□□□□ -0.62
ZNF548-209ENST00000598895 C6orf52Q5T4I8 152 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 IL23RQ5VWK5 629 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 SLC25A25Q6KCM7 469 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 RPUSD3Q6P087 351 aaKnown RBP11.18□□□□□ -0.62
ZNF548-209ENST00000598895 FAM111BQ6SJ93 734 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 IL20RBQ6UXL0 311 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 ZNF227Q86WZ6 799 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 GALNT12Q8IXK2 581 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 CLYBLQ8N0X4 340 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 CYP4Z2PQ8N1L4 340 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 GALNT4Q8N4A0 578 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 TRIML2Q8N7C3 387 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 DRAXINQ8NBI3 349 aaPredicted RBP11.18□□□□□ -0.62
ZNF548-209ENST00000598895 GALNT11Q8NCW6 608 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 TSPAN14Q8NG11 270 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 TSPEARQ8WU66 669 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 TWIST2Q8WVJ9 160 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 ASB15Q8WXK1 588 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 FBXL20Q96IG2 436 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 ART5Q96L15 291 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 MARK4Q96L34 752 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 RASL10BQ96S79 203 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 CCT7Q99832 543 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 GRIP2Q9C0E4 1043 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 MYOTQ9UBF9 498 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 GIMAP2Q9UG22 337 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 CD300AQ9UGN4 299 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 UTS2RQ9UKP6 389 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 PACSIN3Q9UKS6 424 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 ERVK-11Q9UQG0 969 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 DNAJC15Q9Y5T4 150 aa11.18□□□□□ -0.62
ZNF548-209ENST00000598895 SLC28A1O00337 649 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 RGS14O43566 566 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 RSL1D1O76021 490 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 OR6B1O95007 311 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 CLPSP04118 112 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 IGKV3-11P04433 115 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 FGF4P08620 206 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 BMP2P12643 396 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ETS2P15036 469 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 CSNK2A2P19784 350 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 RFC3P40938 356 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 SOX3P41225 446 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 GPR85P60893 370 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ESRRGP62508 458 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 RPL38P63173 70 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ZNF763Q0D2J5 394 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 BIKQ13323 160 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 EXOSC7Q15024 291 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 KCTD21Q4G0X4 260 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 INTS11Q5TA45 600 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 PPP4R4Q6NUP7 873 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 NOXRED1Q6NXP6 359 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 C8orf82Q6P1X6 216 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 Q6ZSR9 355 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 SLC29A4Q7RTT9 530 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 MDGA2Q7Z553 956 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 CARM1Q86X55 608 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ARMC10Q8N2F6 343 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 HORMAD2Q8N7B1 307 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 SIMC1Q8NDZ2 872 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 C7orf57Q8NEG2 295 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 OR5L2Q8NGL0 311 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 B4GALNT2Q8NHY0 566 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 PRR7Q8TB68 274 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 FAM81AQ8TBF8 368 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 FAR1Q8WVX9 515 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 TMEM125Q96AQ2 219 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 PPP1R14BQ96C90 147 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 CNRIP1Q96F85 164 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 RMND5BQ96G75 393 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 SCMH1Q96GD3 660 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ANKRD60Q9BZ19 345 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 TSPAN10Q9H1Z9 355 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 COQ10BQ9H8M1 238 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 CXorf21Q9HAI6 301 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 LRTM1Q9HBL6 345 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 OLAHQ9NV23 265 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 TMEM45AQ9NWC5 275 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 YARS2Q9Y2Z4 477 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 CCL27Q9Y4X3 112 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 ZNF780BQ9Y6R6 833 aa11.17□□□□□ -0.62
ZNF548-209ENST00000598895 GCN1Q92616 2671 aaKnown RBP11.17□□□□□ -0.62
ZNF548-209ENST00000598895 A0A087WXM4 84 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ATP6AP2A0A1C7CYW4 349 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ANKUB1A6NFN9 424 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 A8MVJ9 347 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 G3V3Y1 287 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 H3BNH8 94 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ANGPT2O15123 496 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 NME2P1O60361 137 aa11.16□□□□□ -0.62
ZNF548-209ENST00000598895 ATP6AP2O75787 350 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms