RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 HPNP05981 417 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 FGF4P08620 206 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 CT45A8P0DMV1 189 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 CT45A9P0DMV2 189 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 NTSP30990 170 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 SERPINB5P36952 375 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 MASP1P48740 699 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 CDK9P50750 372 aaKnown RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 NUP107P57740 925 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 NNATQ16517 81 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 CT45A2Q5DJT8 189 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 NHSL2Q5HYW2 709 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 C1orf185Q5T7R7 199 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 FNDC7Q5VTL7 733 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 KANK2Q63ZY3 851 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 TIGD3Q6B0B8 471 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 CLEC6AQ6EIG7 209 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZNF585AQ6P3V2 769 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 GDF7Q7Z4P5 450 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 MCEMP1Q8IX19 187 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 SRRM1Q8IYB3 904 aaKnown RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 LIX1Q8N485 282 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 MREGQ8N565 214 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR5M9Q8NGP3 310 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 DTNBP1Q96EV8 351 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 SLC35A4Q96G79 324 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 JSRP1Q96MG2 331 aaPredicted RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 FAM111AQ96PZ2 611 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 BBS4Q96RK4 519 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 CCT7Q99832 543 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 TREX2Q9BQ50 279 aaPredicted RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 TTYH2Q9BSA4 534 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 ENKD1Q9H0I2 346 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 SLC6A15Q9H2J7 730 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 LRTM1Q9HBL6 345 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 EML4Q9HC35 981 aaKnown RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 C1orf109Q9NX04 203 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 TAS2R9Q9NYW1 312 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 SENP1Q9P0U3 644 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 SPRR3Q9UBC9 169 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 ACAD8Q9UKU7 415 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 RNF6Q9Y252 685 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 TMED5Q9Y3A6 229 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 POLR3HQ9Y535 204 aaPredicted RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 FAM215AQ9Y5M1 114 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 ANKHD1Q8IWZ3 2542 aaKnown RBP9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PRAMEF25A6NGN4 478 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PLOD2O00469 737 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 TBX19O60806 448 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 UGT2B11O75310 529 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 SEC22BO75396 215 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PSMG1O95456 288 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 GLI4P10075 376 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PRF1P14222 555 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PTPN6P29350 595 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 ALDH3A1P30838 453 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 NCBP2P52298 156 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 MRPS22P82650 360 aaKnown RBP9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PMPCAQ10713 525 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 EFR3AQ14156 821 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 BICRALQ6AI39 1079 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 RTL6Q6ICC9 239 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 PM20D2Q8IYS1 436 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR2L13Q8N349 312 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 RPRMLQ8N4K4 120 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR7G2Q8NG99 324 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR1J4Q8NGS1 313 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 CDC26Q8NHZ8 85 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 RNF138Q8WVD3 245 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 KAT2AQ92830 837 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 TMCO6Q96DC7 493 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 DOCK7Q96N67 2140 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 AMDHD1Q96NU7 426 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 COL21A1Q96P44 957 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 OSBPL11Q9BXB4 747 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 FOLH1BQ9HBA9 442 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 C19orf53Q9UNZ5 99 aaPredicted RBP9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 EXO1Q9UQ84 846 aaKnown RBP9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 DNAJC15Q9Y5T4 150 aa9.51□□□□□ -0.89
PTCD2P1-201ENST00000554393 DCHS2Q6V1P9 2916 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 C15orf38-AP3S2A0A0A6YYH1 394 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TTC36A6NLP5 189 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 AHRRA9YTQ3 701 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 C19orf84I3L1E1 186 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 LSM1O15116 133 aaKnown RBP9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TSPAN2O60636 221 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 ICOSLGO75144 302 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 JUNP05412 331 aaKnown RBP9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TUBBP07437 444 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 CHRNGP07510 517 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 DDX5P17844 614 aaKnown RBP9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 IGFBP2P18065 325 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 SDC1P18827 310 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 KRT20P35900 424 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 PTGDSP41222 190 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 KIR3DL1P43629 444 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 PNLIPRP2P54317 469 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 CORO7P57737 925 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 TFF3Q07654 80 aa9.5□□□□□ -0.89
PTCD2P1-201ENST00000554393 CRYZQ08257 329 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms