RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MT-ND5P03915 603 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 NPPBP16860 134 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 HK1P19367 917 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 P2RY2P41231 377 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 RGS6P49758 472 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PRKCDQ05655 676 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 IHHQ14623 411 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 C1orf189Q5VU69 101 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 UBE2UQ5VVX9 321 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR2L5Q8NG80 312 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 TM4SF18Q96CE8 201 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 MS4A4EQ96PG1 132 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 TIMM29Q9BSF4 260 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 BTBD2Q9BX70 525 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ACTR6Q9GZN1 396 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 POLMQ9NP87 494 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 HPF1Q9NWY4 346 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ERVK13-1Q9NX77 482 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FBXL21Q9UKT6 434 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 LATO43561 262 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 HCN1O60741 890 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ANXA3P12429 323 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 BMP4P12644 408 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CHMP24386 653 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 EDNRAP25101 427 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 C21orf33P30042 268 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 GRK6P43250 576 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 GPR4P46093 362 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 BLKP51451 505 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ID2Q02363 134 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FRRS1Q6ZNA5 592 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 LMNTD1Q8N9Z9 388 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 POMGNT2Q8NAT1 580 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR52E1Q8NGJ3 308 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FKBP10Q96AY3 582 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 COQ8BQ96D53 544 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 MIR1-1HGQ9H1L0 117 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OCEL1Q9H607 264 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FBRSQ9HAH7 460 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ACSS1Q9NUB1 689 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 NDUFAF4Q9P032 175 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PPIL1Q9Y3C6 166 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR6C74A6NCV1 312 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 B4DGG1 531 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 J3QLW9 94 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 GMFGO60234 142 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ZNF888P0CJ79 500 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 GNSP15586 552 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ZNF19P17023 458 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PTNP21246 168 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FUT4P22083 530 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 IL12BP29460 328 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PIN1Q13526 163 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 LRRC26Q2I0M4 334 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SAXO2Q658L1 398 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CCBE1Q6UXH8 406 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 GDPGP1Q6ZNW5 385 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FAM217AQ8IXS0 508 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ZNF527Q8NB42 609 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR2L8Q8NGY9 312 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PHOSPHO2Q8TCD6 241 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ALG14Q96F25 216 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SECISBP2Q96T21 854 aaKnown RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 ZNF559Q9BR84 538 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 MS4A8Q9BY19 250 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SLC17A9Q9BYT1 436 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CHIAQ9BZP6 476 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CXorf36Q9H7Y0 433 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 VNN3Q9NY84 501 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 NDRG4Q9ULP0 352 aaKnown RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 PATJQ8NI35 1801 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 SMIM30A4D0T7 59 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 ELOA3DA6NLF2 546 aaPredicted RBP5.46□□□□□ -1.53
VPS50-220ENST00000544910 INMT-MINDY4F8WBC2 141 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 GAPDHSO14556 408 aaPredicted RBP5.46□□□□□ -1.53
VPS50-220ENST00000544910 UBXN7O94888 489 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 CD160O95971 181 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 DBIP07108 87 aaKnown RBP5.46□□□□□ -1.53
VPS50-220ENST00000544910 CTSLP07711 333 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 MC3RP41968 323 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 SLC3A1Q07837 685 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 MAP4K2Q12851 820 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 ENPP2Q13822 863 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 ELOA3BQ3SY89 546 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 ANKRD34AQ69YU3 496 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 RAB12Q6IQ22 244 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 PODNL1Q6PEZ8 512 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 ARL9Q6T311 187 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 TIGD4Q8IY51 512 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 LAS2Q8IYD9 372 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 UBQLNLQ8IYU4 475 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 PARP16Q8N5Y8 322 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 MFSD9Q8NBP5 474 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 ELOA3Q8NG57 546 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 OR51G2Q8NGK0 314 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 TMEM163Q8TC26 289 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 S100PBPQ96BU1 408 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 NEURL3Q96EH8 262 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 PFDN5Q99471 154 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms