RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 FAM136AQ96C01 138 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 RHBDF1Q96CC6 855 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CTHRC1Q96CG8 243 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 C11orf24Q96F05 449 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PLPPR2Q96GM1 343 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SNF8Q96H20 258 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 RBM18Q96H35 190 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ZC3HAV1LQ96H79 300 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 FBXL20Q96IG2 436 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF845Q96IR2 970 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ADAD1Q96M93 576 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 GNRHR2Q96P88 292 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SH3GL1Q99961 368 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PIGQQ9BRB3 760 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PELOQ9BRX2 385 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 LRRC1Q9BTT6 524 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ROGDIQ9GZN7 287 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PITHD1Q9GZP4 211 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ACTR8Q9H981 624 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 COPS7BQ9H9Q2 264 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 LYRM4Q9HD34 91 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 NGBQ9NPG2 151 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 TCF7L2Q9NQB0 619 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SNX15Q9NRS6 342 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 BFARQ9NZS9 450 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SH2B3Q9UQQ2 575 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 LIPT1Q9Y234 373 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CRYL1Q9Y2S2 319 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 DHRS7Q9Y394 339 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 N6AMT1Q9Y5N5 214 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 A0A096LNT2 108 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 IQANK1A0A1B0GTG1 560 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 LRIT2A6NDA9 550 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SLC22A20A6NK97 555 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 HNRNPCL2B2RXH8 293 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 CDC7O00311 574 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 PLOD2O00469 737 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ERI3O43414 337 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 GPRIN2O60269 458 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 HNRNPCL1O60812 293 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 CBR3O75828 277 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 VAPBO95292 243 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ETHE1O95571 254 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 CD3EP07766 207 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SOD3P08294 240 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ENO2P09104 434 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FCGR2AP12318 317 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 RPS2P15880 293 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF708P17019 499 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 IGFBP5P24593 272 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 PTPN6P29350 595 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 RPL22P35268 128 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 CDKN1AP38936 164 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 STT3AP46977 705 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MARCKSL1P49006 195 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 NPY2RP49146 381 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 HNRNPFP52597 415 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 NUDT6P53370 316 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 LIM2P55344 173 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 GFRA1P56159 465 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 RWDD2BP57060 319 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 IGLV3-21P80748 117 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 C2orf54Q08AI8 447 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 CUL1Q13616 776 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 RUNX2Q13950 521 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 BCL2A1Q16548 175 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ADPRMQ3LIE5 342 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FAM174BQ3ZCQ3 159 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 EIPR1Q53HC9 387 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 PRR31Q5SQ13 230 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FAM120AOSQ5T036 256 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FNDC7Q5VTL7 733 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SLC30A6Q6NXT4 461 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MZT2AQ6P582 158 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 VWA1Q6PCB0 445 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF474Q6S9Z5 364 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 C4orf22Q6V702 233 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 CYHR1Q6ZMK1 362 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 RNF111Q6ZNA4 994 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SSX8Q7RTT4 187 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 PEX5LQ8IYB4 626 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 KLHDC8AQ8IYD2 350 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 C3orf56Q8N813 242 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FAM169BQ8N8A8 192 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF321PQ8N8H1 164 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 GBP7Q8N8V2 638 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 TMEM52Q8NDY8 209 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 C17orf47Q8NEP4 570 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 OR2L5Q8NG80 312 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 OR14L1PQ8NHC6 308 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FBXO27Q8NI29 283 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 UHMK1Q8TAS1 419 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SPPL2AQ8TCT8 520 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MIPOL1Q8TD10 442 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 AENQ8WTP8 325 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SMAP2Q8WU79 429 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MAIP1Q8WWC4 291 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms