RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GOLGA6L1Q8N7Z2 621 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 KBTBD8Q8NFY9 601 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 OR1J4Q8NGS1 313 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 OR14L1PQ8NHC6 308 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 C10orf105Q8TEF2 133 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 EEF1AKMT1Q8WVE0 214 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ANKRD49Q8WVL7 239 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 KCNJ9Q92806 393 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 MAPKAP1Q9BPZ7 522 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ERVK-6Q9BXR3 956 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ROPN1BQ9BZX4 212 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 ACTR6Q9GZN1 396 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ROPN1Q9HAT0 212 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 PELI2Q9HAT8 420 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PARVBQ9HBI1 364 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 GALNT9Q9HCQ5 603 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ARMCX1Q9P291 453 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 TXNDC16Q9P2K2 825 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 IKZF3Q9UKT9 509 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 CORO1CQ9ULV4 474 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 ERVK-19Q9WJR5 959 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 COMMD10Q9Y6G5 202 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 VWFP04275 2813 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TMEM89A2RUT3 159 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 SYNDIG1LA6NDD5 238 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TRIM49D1C9J1S8 452 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TMPRSS2O15393 492 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 ALDOAP04075 364 aaKnown RBP8.17□□□□□ -1.1
NUP54-211ENST00000512151 SNRPAP09012 282 aaKnown RBP8.17□□□□□ -1.1
NUP54-211ENST00000512151 SLC25A16P16260 332 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 HNF1AP20823 631 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TCEA1P23193 301 aaKnown RBP8.17□□□□□ -1.1
NUP54-211ENST00000512151 MAGEA12P43365 314 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 STT3AP46977 705 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 GZMKP49863 264 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 SERPINB9P50453 376 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 SLC37A1P57057 533 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 POU4F1Q01851 419 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 IFFO1Q0D2I5 559 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 DLG1Q12959 904 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 RASA2Q15283 850 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 ZKSCAN8Q15776 578 aaPredicted RBP8.17□□□□□ -1.1
NUP54-211ENST00000512151 NCMAPQ5T1S8 102 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 OR2A2Q6IF42 318 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 ADNP2Q6IQ32 1131 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 DNAJC14Q6Y2X3 702 aaPredicted RBP8.17□□□□□ -1.1
NUP54-211ENST00000512151 ZNF793Q6ZN11 406 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TIFABQ6ZNK6 161 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TMPRSS11BQ86T26 416 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 PRR22Q8IZ63 422 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 BANPQ8N9N5 519 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 WDSUB1Q8N9V3 476 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 CCT6BQ92526 530 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 FBXL20Q96IG2 436 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 SERINC2Q96SA4 455 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 AIF1LQ9BQI0 150 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 TRIM2Q9C040 744 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 CCDC68Q9H2F9 335 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 PRDM7Q9NQW5 492 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 SNX15Q9NRS6 342 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 PSMC3IPQ9P2W1 217 aaPredicted RBP8.17□□□□□ -1.1
NUP54-211ENST00000512151 LGALS13Q9UHV8 139 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 PLCE1Q9P212 2302 aa8.17□□□□□ -1.1
NUP54-211ENST00000512151 B4DXG7 233 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 C2P06681 752 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 C8GP07360 202 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 SLC35E2BP0CK96 405 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 CREB1P16220 341 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 STMN1P16949 149 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 USF1P22415 310 aaPredicted RBP8.16□□□□□ -1.1
NUP54-211ENST00000512151 CNTFP26441 200 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 GCKP35557 465 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 GYS2P54840 703 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 DSCR9P59020 149 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 RAB10P61026 200 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 ACTG1P63261 375 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 IRF9Q00978 393 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 ZNF267Q14586 743 aaPredicted RBP8.16□□□□□ -1.1
NUP54-211ENST00000512151 CTU2Q2VPK5 515 aaKnown RBP8.16□□□□□ -1.1
NUP54-211ENST00000512151 ADPRMQ3LIE5 342 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 TNFAIP8L3Q5GJ75 292 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 CEP85LQ5SZL2 805 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 ABHD17CQ6PCB6 329 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 SCIMPQ6UWF3 145 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 SEZ6L2Q6UXD5 910 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 SLC29A4Q7RTT9 530 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 UBE3DQ7Z6J8 389 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 GPSM1Q86YR5 675 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 SPATA6LQ8N4H0 392 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 OR2L5Q8NG80 312 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 FBXL8Q96CD0 374 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 DGAT2Q96PD7 388 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 NODALQ96S42 347 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 ZNF696Q9H7X3 374 aa8.16□□□□□ -1.1
NUP54-211ENST00000512151 RNF122Q9H9V4 155 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms