RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CHRNA6Q15825 494 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ZNF528Q3MIS6 628 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SLC36A2Q495M3 483 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 IFI44LQ53G44 452 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ARHGAP15Q53QZ3 475 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 NBPF12Q5TAG4 269 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 DCAF12L2Q5VW00 463 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ARL9Q6T311 187 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SBSNQ6UWP8 590 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 TMUB2Q71RG4 321 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ZNF565Q8N9K5 539 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 RPLP0P6Q8NHW5 317 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 TMEM163Q8TC26 289 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 KCNJ9Q92806 393 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ISOC2Q96AB3 205 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SCLYQ96I15 445 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 OR4K3Q96R72 315 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 RSPO3Q9BXY4 272 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 MED20Q9H944 212 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 C5AR2Q9P296 337 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SCP2D1Q9UJQ7 156 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PURGQ9UJV8 347 aaKnown RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SLC22A14Q9Y267 594 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 FAM96BQ9Y3D0 163 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PLEKHM1Q9Y4G2 1056 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 COL11A2P13942 1736 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SBF2Q86WG5 1849 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 KNL1Q8NG31 2342 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 GNG14A0A1W2PPG7 69 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SOWAHBA6NEL2 793 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 CPSF4LA6NMK7 179 aaKnown RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 FAM25EA8MYX2 175 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 MCRIP1C9JLW8 97 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 GPR37O15354 613 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SUSD5O60279 629 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SLC25A14O95258 325 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 MRPL3P09001 348 aaKnown RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 FGF2P09038 288 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ANXA8P13928 327 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 DDX6P26196 483 aaKnown RBP eCLIP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ACSL1P33121 698 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 AIF1P55008 147 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 OR2B8PP59922 312 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 MEF2AQ02078 507 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 POU4F2Q12837 409 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PDZK1IP1Q13113 114 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 LRRC73Q5JTD7 316 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 FCRLBQ6BAA4 426 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ZNF425Q6IV72 752 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 TMEM71Q6P5X7 295 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 C11orf88Q6PI97 169 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 NAA40Q86UY6 237 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 FAM181AQ8N9Y4 354 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 OR4A15Q8NGL6 344 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 IGSF8Q969P0 613 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PGAP3Q96FM1 320 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SLC2A13Q96QE2 648 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 GPR20Q99678 358 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 SUCNR1Q9BXA5 334 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PLA2G12AQ9BZM1 189 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ZYG11BQ9C0D3 744 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 GPATCH2Q9NW75 528 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ANGPT4Q9Y264 503 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 ATG4BQ9Y4P1 393 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
LIMCH1-207ENST00000508466 LY75O60449 1722 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PMS2P1A4D2B8 440 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 RAD1O60671 282 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PQBP1O60828 265 aaKnown RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 MTX2O75431 263 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 HTR3BO95264 441 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SOD1P00441 154 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 TRBC1P01850 177 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 S100A6P06703 90 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 NR2F6P10588 404 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 GPR15P49685 360 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 RENBPP51606 427 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 PRMT2P55345 433 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SORDQ00796 357 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 CAMK1Q14012 370 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ZNF235Q14590 738 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 RGNQ15493 299 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ZXDCQ2QGD7 858 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 EXOSC6Q5RKV6 272 aaKnown RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 NOXRED1Q6NXP6 359 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SLC27A4Q6P1M0 643 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SMARCD3Q6STE5 483 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 UNQ6126/PRO20091Q6UXV3 157 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 DPPA4Q7L190 304 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 C2orf73Q8N5S3 287 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 CLDN22Q8N7P3 220 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 OR5J2Q8NH18 312 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 ARRDC2Q8TBH0 407 aa6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 SPRYD4Q8WW59 207 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-207ENST00000508466 AP3S1Q92572 193 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms