RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GNMTQ14749 295 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 HORMAD2Q8N7B1 307 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 MDGA1Q8NFP4 955 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 OR8K5Q8NH50 307 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 NANOS1Q8WY41 292 aaKnown RBP18.18■□□□□ 0.5
COL27A1-207ENST00000494090 TSACCQ96A04 125 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-207ENST00000494090 TMIGD2Q96BF3 282 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 DDIT4LQ96D03 193 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 ZFYVE21Q9BQ24 234 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 ARNT2Q9HBZ2 717 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 GDE1Q9NZC3 331 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 GSKIPQ9P0R6 139 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 TRBV2A0A0J9YWF9 115 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 TCRBV3S1A0A5B6 114 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 FCER2P06734 321 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 PCGF2P35227 344 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 BEND4Q6ZU67 534 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 RAB11FIP2Q7L804 512 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 TTC9BQ8N6N2 239 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 SERINC2Q96SA4 455 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 ACTRT3Q9BYD9 372 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 NUFIP1Q9UHK0 495 aaKnown RBP18.18■□□□□ 0.5
COL27A1-207ENST00000494090 GPR4P46093 362 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 CASTOR1Q8WTX7 329 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 PRLP01236 227 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 PROS1P07225 676 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 H2AFB2P0C5Z0 115 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 LHCGRP22888 699 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF140P52738 457 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-207ENST00000494090 HAVCR2Q8TDQ0 301 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF350Q9GZX5 532 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ABCG5Q9H222 651 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 NKX2-4Q9H2Z4 354 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ACOT13Q9NPJ3 140 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 CA14Q9ULX7 337 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ACTL7AQ9Y615 435 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 DIRAS3O95661 229 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ACVR1BP36896 505 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF551Q7Z340 670 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-207ENST00000494090 SERPINA11Q86U17 422 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 METTL25Q8N6Q8 603 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ACVR1CQ8NER5 493 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 SCGB1C1Q8TD33 95 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 PITHD1Q9GZP4 211 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-207ENST00000494090 GORASP2Q9H8Y8 452 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 FAIMQ9NVQ4 179 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 GPR45Q9Y5Y3 372 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 BOLA2-SMG1P6H3BVE0 249 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 RNASET2O00584 256 aaKnown RBP18.17■□□□□ 0.5
COL27A1-207ENST00000494090 CD40LGP29965 261 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 OR6C4Q8NGE1 309 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 FAM3CQ92520 227 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 ATG5Q9H1Y0 275 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 GPR89AB7ZAQ6 455 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 GPR89BP0CG08 455 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 AIMP2Q13155 320 aaKnown RBP18.17■□□□□ 0.5
COL27A1-207ENST00000494090 NSDHLQ15738 373 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 RAB41Q5JT25 222 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 CHST14Q8NCH0 376 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 NMNAT1Q9HAN9 279 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-207ENST00000494090 UBQLN2Q9UHD9 624 aa18.17■□□□□ 0.5
COL27A1-207ENST00000494090 LOC285095A0A1B0GVY8 99 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TRAPPC13A5PLN9 417 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 IRF2P14316 349 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 VIPR2P41587 438 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 MAN2A2P49641 1150 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 FAM189BP81408 668 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TDGQ13569 410 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 RHEBQ15382 184 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 IER5LQ5T953 404 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 C17orf99Q6UX52 265 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TMEM151AQ8N4L1 468 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 JPH3Q8WXH2 748 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 NTMT1Q9BV86 223 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 CD93Q9NPY3 652 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ATG12O94817 140 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ADH7P40394 386 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TMEM25Q86YD3 366 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 OR7G3Q8NG95 312 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 HDHD5Q9BXW7 423 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 MYH7BA7E2Y1 1941 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 NPIPB15A6NHN6 443 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 E2F3O00716 465 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 SMAD9O15198 467 aaKnown RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ARF3P61204 181 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ARF1P84077 181 aaKnown RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TAZQ16635 292 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 MORN1Q5T089 497 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 SLC18B1Q6NT16 456 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 GDPGP1Q6ZNW5 385 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 DIO2Q92813 273 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 FAM46BQ96A09 425 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 CHFRQ96EP1 664 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 FAM46AQ96IP4 442 aaKnown RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 CCDC86Q9H6F5 360 aaKnown RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 FOLH1BQ9HBA9 442 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 CPNE5Q9HCH3 593 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 CSNK1G1Q9HCP0 422 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 SRA1Q9HD15 236 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms