RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 C3orf14Q9HBI5 128 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 Q9N2J8 555 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SIRT5Q9NXA8 310 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 QPCTLQ9NXS2 382 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 CAMK2AQ9UQM7 478 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 TMED5Q9Y3A6 229 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 DNAJC15Q9Y5T4 150 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 INTS1Q8N201 2190 aaKnown RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 HCFC1P51610 2035 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 ANKRD33BA6NCL7 494 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 MYO1GB0I1T2 1018 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 TM9SF1O15321 606 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 WDR1O75083 606 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 NME6O75414 186 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-222ENST00000473373 IGHG3P01860 377 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 RFPL3SP0C7P2 107 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 CREB1P16220 341 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 AGAP20933 346 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 PRPH2P23942 346 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 ACVR2AP27037 513 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 RPL3P39023 403 aaKnown RBP10.56□□□□□ -0.72
CPNE1-222ENST00000473373 SERPINB4P48594 390 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 CLK3P49761 638 aaKnown RBP10.56□□□□□ -0.72
CPNE1-222ENST00000473373 EMDP50402 254 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 PSMD4P55036 377 aaKnown RBP10.56□□□□□ -0.72
CPNE1-222ENST00000473373 CORO7P57737 925 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 PSPHP78330 225 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 DECR1Q16698 335 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 B3GNT6Q6ZMB0 384 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 FGD2Q7Z6J4 655 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 OR7G2Q8NG99 324 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 OR2T11Q8NH01 316 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 OR14L1PQ8NHC6 308 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 JADE3Q92613 823 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 EFHD2Q96C19 240 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-222ENST00000473373 EGLN2Q96KS0 407 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 GNRHR2Q96P88 292 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 ZIM3Q96PE6 472 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 C1orf50Q9BV19 199 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 TMEM109Q9BVC6 243 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 ANGPTL4Q9BY76 406 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 GLIPR2Q9H4G4 154 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 SH2D2AQ9NP31 389 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 BAIAP2L1Q9UHR4 511 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF639Q9UID6 485 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 DKKL1Q9UK85 242 aa10.56□□□□□ -0.72
CPNE1-222ENST00000473373 KLF2Q9Y5W3 355 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-222ENST00000473373 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 OR6C70A6NIJ9 312 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 LRRC3CA6NJW4 275 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 LSM1O15116 133 aaKnown RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 CFLARO15519 480 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 SCO2O43819 266 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PLOD3O60568 738 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 ICOSLGO75144 302 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 UGT2B11O75310 529 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 ZWINTO95229 277 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 KCNH1O95259 989 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 FGF4P08620 206 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 GABRA1P14867 456 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 SDC1P18827 310 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 TCEA1P23193 301 aaKnown RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 TACR1P25103 407 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 DUSP8Q13202 625 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 MAD2L1Q13257 205 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PDCD2Q16342 344 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 HYAL4Q2M3T9 481 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 SPDYE7PQ495Y7 208 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 VPS26BQ4G0F5 336 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 RFTN2Q52LD8 501 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 C1orf185Q5T7R7 199 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 DESI1Q6ICB0 168 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF551Q7Z340 670 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 OR4K17Q8NGC6 315 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 NEIL3Q8TAT5 605 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 MGARPQ8TDB4 240 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 SLC9A6Q92581 669 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 CIDECQ96AQ7 238 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 C11orf24Q96F05 449 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 TMEM41AQ96HV5 264 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 AMDHD1Q96NU7 426 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 BTBD9Q96Q07 612 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 NODALQ96S42 347 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PRPF18Q99633 342 aaKnown RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 GALNT9Q9HCQ5 603 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PPP4R1LQ9P1A2 415 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 RAB21Q9UL25 225 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 EIF3LQ9Y262 564 aaKnown RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 GPR55Q9Y2T6 319 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-222ENST00000473373 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 SLC6A5Q9Y345 797 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 SNX8Q9Y5X2 465 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PCNX3Q9H6A9 2034 aa10.55□□□□□ -0.72
CPNE1-222ENST00000473373 PKDREJQ9NTG1 2253 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 A0A087WV62 115 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 FAM47E-STBD1D6RA91 191 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms