RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 MRPS22P82650 360 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 GUCY1A3Q02108 690 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CYP27C1Q4G0S4 372 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 TBCELQ5QJ74 424 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 ZCCHC12Q6PEW1 402 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 NUP54Q7Z3B4 507 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CPSF7Q8N684 471 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 OR2M7Q8NG81 312 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 SPPL2AQ8TCT8 520 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 SLC9A6Q92581 669 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 JADE3Q92613 823 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 TMCO6Q96DC7 493 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 FAM120BQ96EK7 910 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CHMP6Q96FZ7 201 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 RILPQ96NA2 401 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 FRMD6Q96NE9 622 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 SECISBP2Q96T21 854 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 DOHHQ9BU89 302 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 METTL7AQ9H8H3 244 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 ZIM2Q9NZV7 527 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 NTMQ9P121 344 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 DCTN4Q9UJW0 460 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CHCHD2Q9Y6H1 151 aaPredicted RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 C9JVG2 144 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 NPIPA5E9PKD4 350 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 ACOT7O00154 380 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 TFECO14948 347 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 IL6P05231 212 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 KRT16P08779 473 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 ALOX5P09917 674 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 EDN3P14138 238 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 GABRA3P34903 492 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 PIGAP37287 484 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 MDH1P40925 334 aaKnown RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 RFC3P40938 356 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 PSMD4P55036 377 aaKnown RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 WNT3P56703 355 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 HBA1P69905 142 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 PSG6Q00889 435 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 LRRC74AQ0VAA2 488 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 EFR3AQ14156 821 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 DECR1Q16698 335 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 PRAMEF20Q5VT98 475 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 NPSR1Q6W5P4 371 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 WDR53Q7Z5U6 358 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 ANKRD46Q86W74 232 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 CLECL1Q8IZS7 167 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 ZFP62Q8NB50 900 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 PSMA8Q8TAA3 256 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 SFXN5Q8TD22 340 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 GPR151Q8TDV0 419 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 TEX37Q96LM6 180 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 COL21A1Q96P44 957 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 OR52E6Q96RD3 313 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 ADOQ96SZ5 270 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 BARD1Q99728 777 aaKnown RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 LMF2Q9BU23 707 aaKnown RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 CXorf36Q9H7Y0 433 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 SIRT3Q9NTG7 399 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 DEPPQ9NTK1 212 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 CBLCQ9ULV8 474 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 BOKQ9UMX3 212 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 FAF1Q9UNN5 650 aaPredicted RBP12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 TRIM33Q9UPN9 1127 aa12.89□□□□□ -0.35
GTF3C3-206ENST00000448539 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 A0A0G2JND7 137 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 ANKUB1A6NFN9 424 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 OR6C70A6NIJ9 312 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 HS6ST1O60243 411 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 SNX4O95219 450 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 KCNH1O95259 989 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 PGRP06401 933 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 GNLYP22749 145 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 IL12AP29459 219 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 RFX3P48380 749 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 POLR2JP52435 117 aaKnown RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 DGKQP52824 942 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 PPIAP62937 165 aaKnown RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 GAB1Q13480 694 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 LASP1Q14847 261 aaKnown RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 MFSD12Q6NUT3 480 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 SLC22A16Q86VW1 577 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 ST6GALNAC3Q8NDV1 305 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 OR4N2Q8NGD1 307 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 OR5AK3PQ8NH89 298 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 RFWD2Q8NHY2 731 aa12.88□□□□□ -0.35
GTF3C3-206ENST00000448539 FBXO30Q8TB52 745 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms