RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 RHBGQ9H310 441 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 OR51B5Q9H339 312 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ELOVL6Q9H5J4 265 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 NT5DC2Q9H857 520 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FANCEQ9HB96 536 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FAM60AQ9NP50 221 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 DMRT3Q9NQL9 472 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 TMEM184CQ9NVA4 438 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 HRASLS2Q9NWW9 162 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 LRFN1Q9P244 771 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ARMCX1Q9P291 453 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 SNX6Q9UNH7 406 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF835Q9Y2P0 537 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KLK4Q9Y5K2 254 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 DSCAMO60469 2012 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FREM1Q5H8C1 2179 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 VWFP04275 2813 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 LOC105369274A0A096LPK9 316 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 IGHV5-51A0A0C4DH38 117 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 LOC102723532A0A0G2JNH3 316 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SLC9B1P1A6NJY1 282 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 C9JVG2 144 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 H7C1Q1 480 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 FOXE1O00358 373 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SAP18O00422 153 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RTCAO00442 366 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PLPP1O14494 284 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SOCS6O14544 535 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ANKRD28O15084 1053 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 UBDO15205 165 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PHF1O43189 567 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RGS14O43566 566 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 OR1F1O43749 312 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 KLF7O75840 302 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RSL1D1O76021 490 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CCNDBP1O95273 360 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CHEK2O96017 543 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 HBQ1P09105 142 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 T-ENOLP0DO92 83 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 G6PDP11413 515 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 HSD3B1P14060 373 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 LBPP18428 481 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 NCF2P19878 526 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 GPX3P22352 226 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 HSD3B2P26439 372 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 MST1P26927 711 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PIK3R1P27986 724 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CHRNB4P30926 498 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 HNRNPH1P31943 449 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RORAP35398 523 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 MRPL19P49406 292 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 TNFSF10P50591 281 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 NME5P56597 212 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ERVK-8P63133 956 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RPL38P63173 70 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RAE1P78406 368 aaKnown RBP4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ARG2P78540 354 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 HSD11B2P80365 405 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 EMX2Q04743 252 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF33BQ06732 778 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 TFF3Q07654 80 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CR1LQ2VPA4 569 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 AP5B1Q2VPB7 878 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 DEFB110Q30KQ9 67 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PAGE2BQ5JRK9 111 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 METTL21CQ5VZV1 264 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 FAM91A1Q658Y4 838 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 FRMPD2BQ6IN97 320 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF585AQ6P3V2 769 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 FIGLAQ6QHK4 219 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 TMIGD1Q6UXZ0 262 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 TRPM8Q7Z2W7 1104 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 ADCK2Q7Z695 626 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CLNKQ7Z7G1 428 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 FUNDC1Q8IVP5 155 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 OR4N4Q8N0Y3 316 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 KRT78Q8N1N4 520 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 D2HGDHQ8N465 521 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 DNAJC22Q8N4W6 341 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CELF2-AS1Q8N7Q2 184 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 AMER3Q8N944 861 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 MFSD9Q8NBP5 474 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SLC38A9Q8NBW4 561 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 OR9I1Q8NGQ6 314 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 OR2Y1Q8NGV0 311 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 LILRB4Q8NHJ6 448 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CEP70Q8NHQ1 597 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SUN3Q8TAQ9 357 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PHOSPHO1Q8TCT1 267 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 SLC22A18Q96BI1 424 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CMTM7Q96FZ5 175 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 TEX37Q96LM6 180 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 PPP3R2Q96LZ3 170 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 OR2A5Q96R48 311 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 F2RL3Q96RI0 385 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 DMRTA2Q96SC8 542 aa4.44□□□□□ -1.7
PTPN4-206ENST00000441089 CD180Q99467 661 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms