RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 INMT-MINDY4F8WBC2 141 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 SPINT1O43278 529 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 AKAP8O43823 692 aaKnown RBP16.92■□□□□ 0.3
GNE-201ENST00000377902 RB1P06400 928 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 GNSP15586 552 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 CDH11P55287 796 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 C19orf57Q0VDD7 668 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 LASP1Q14847 261 aaKnown RBP16.92■□□□□ 0.3
GNE-201ENST00000377902 MINDY4Q4G0A6 757 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 TIGD3Q6B0B8 471 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 UBE3DQ7Z6J8 389 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 AMIGO1Q86WK6 493 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 KLBQ86Z14 1044 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 FAM20CQ8IXL6 584 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 TIGD4Q8IY51 512 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 SIX5Q8N196 739 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 SUN5Q8TC36 379 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 HDHD2Q9H0R4 259 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 TM7SF3Q9NS93 570 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 MRPS18AQ9NVS2 196 aaKnown RBP16.92■□□□□ 0.3
GNE-201ENST00000377902 KIF26AQ9ULI4 1882 aaPredicted RBP16.92■□□□□ 0.3
GNE-201ENST00000377902 SLC9A8Q9Y2E8 581 aa16.92■□□□□ 0.3
GNE-201ENST00000377902 FAM183AA6NL82 134 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 FAM170BA6NMN3 283 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 LCMT2O60294 686 aaKnown RBP16.91■□□□□ 0.3
GNE-201ENST00000377902 UBXN7O94888 489 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 ACP5P13686 325 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 IDNKQ5T6J7 187 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 PIP5KL1Q5T9C9 394 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 FAM205BPQ63HN1 556 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 TRILQ7L0X0 811 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 OR4Q3Q8NH05 313 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 UBE2E3Q969T4 207 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 NIPAL2Q9H841 368 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 DKK3Q9UBP4 350 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 CSNK1G3Q9Y6M4 447 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 ZC3H12DA2A288 527 aaKnown RBP16.91■□□□□ 0.3
GNE-201ENST00000377902 C8orf89P0DMQ9 161 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 TRIM23P36406 574 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 GPR1P46091 355 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 TMEM91Q6ZNR0 172 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 DTD2Q96FN9 168 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 PRRC1Q96M27 445 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 ZNF649Q9BS31 505 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 SEMA4GQ9NTN9 838 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 MAT2BQ9NZL9 334 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 EXTL2Q9UBQ6 330 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 WNT6Q9Y6F9 365 aa16.91■□□□□ 0.3
GNE-201ENST00000377902 FABP7O15540 132 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 ERAL1O75616 437 aaKnown RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 TRHRP34981 398 aaPredicted RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 FRKP42685 505 aaPredicted RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 MAPK9P45984 424 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 NCBP2P52298 156 aaKnown RBP eCLIP16.9■□□□□ 0.3
GNE-201ENST00000377902 TAS2R41P59536 307 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 DUSP2Q05923 314 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 FZD5Q13467 585 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 C17orf64Q86WR6 236 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 VRK2Q86Y07 508 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SLC38A6Q8IZM9 456 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 PLA2G15Q8NCC3 412 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 C17orf62Q9BQA9 187 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 PPIL3Q9H2H8 161 aaKnown RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 SLC28A3Q9HAS3 691 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SLC23A2Q9UGH3 650 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 EXOSC1Q9Y3B2 195 aaKnown RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 SIRT4Q9Y6E7 314 aaPredicted RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 COL4A3Q01955 1670 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 LRRK1Q38SD2 2015 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 NUP210Q8TEM1 1887 aaPredicted RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 MYO10Q9HD67 2058 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 A0A0A6YYJ9 748 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 OR1F1O43749 312 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 ORC5O43913 435 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 C8AP07357 584 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 GPR4P46093 362 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 TM4SF4P48230 202 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 MAB21L1Q13394 359 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 GPR176Q14439 515 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SF3A2Q15428 464 aaKnown RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 FAM27D1Q5T7N8 215 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 FAM109AQ8N4B1 249 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 MED30Q96HR3 178 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 MAP6Q96JE9 813 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 AMDHD1Q96NU7 426 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SECISBP2Q96T21 854 aaKnown RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 TBX5Q99593 518 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 DPH7Q9BTV6 452 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 C11orf49Q9H6J7 331 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 NFKBIL1Q9UBC1 381 aaPredicted RBP16.9■□□□□ 0.3
GNE-201ENST00000377902 LIPT1Q9Y234 373 aa16.9■□□□□ 0.3
GNE-201ENST00000377902 SOCS6O14544 535 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 KIAA0355O15063 1070 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 SLC43A1O75387 559 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 SRP9P49458 86 aaKnown RBP16.89■□□□□ 0.3
GNE-201ENST00000377902 FCN2Q15485 313 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 NDUFA9Q16795 377 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms