RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 MED28Q9H204 178 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 LINC00597Q9H2U6 94 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 TRPC4Q9UBN4 977 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 COL4A6Q14031 1691 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 A0A087WUU8 490 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 SLC22A5O76082 557 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 MAP4K2Q12851 820 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 ARHGEF6Q15052 776 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF791Q3KP31 576 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-202ENST00000375299 EOGTQ5NDL2 527 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 HMGN2P46Q86SG4 172 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 BBS10Q8TAM1 723 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF431Q8TF32 576 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-202ENST00000375299 SPRYD4Q8WW59 207 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-202ENST00000375299 AUTS2Q8WXX7 1259 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 MYLIPQ8WY64 445 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 SMG9Q9H0W8 520 aaKnown RBP19.88■□□□□ 0.77
UPF3A-202ENST00000375299 EPHX3Q9H6B9 360 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 TSPAN11A1L157 253 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 FAM170BA6NMN3 283 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 PQBP1O60828 265 aaKnown RBP19.87■□□□□ 0.77
UPF3A-202ENST00000375299 PAHP00439 452 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 CXCL10P02778 98 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 XPAP23025 273 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-202ENST00000375299 SPOUT1Q5T280 376 aaKnown RBP19.87■□□□□ 0.77
UPF3A-202ENST00000375299 LCTLQ6UWM7 567 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 TRMT11Q7Z4G4 463 aaKnown RBP19.87■□□□□ 0.77
UPF3A-202ENST00000375299 LRRC17Q8N6Y2 441 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 RFKQ969G6 155 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 IL17FQ96PD4 163 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 ZNF649Q9BS31 505 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 SPATA5L1Q9BVQ7 753 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 MS4A8Q9BY19 250 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 GLTPQ9NZD2 209 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 SPEF1Q9Y4P9 236 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 TEX51A0A1B0GUA7 166 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 PRR23AA6NEV1 266 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 GTPBP1O00178 669 aaKnown RBP19.87■□□□□ 0.77
UPF3A-202ENST00000375299 LILRB5O75023 590 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 ACP5P13686 325 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 TSPAN31Q12999 210 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 CLEC12AQ5QGZ9 265 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 BCL2L15Q5TBC7 163 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 TMEM91Q6ZNR0 172 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 RASSF6Q6ZTQ3 369 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 ASB18Q6ZVZ8 466 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 OR52N1Q8NH53 320 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 RFT1Q96AA3 541 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 CBLCQ9ULV8 474 aa19.87■□□□□ 0.77
UPF3A-202ENST00000375299 LANCL1O43813 399 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 ELFN1P0C7U0 828 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 IFNGR2P38484 337 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 BUD31P41223 144 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 IDNKQ5T6J7 187 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 AADACL4Q5VUY2 407 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 SDE2Q6IQ49 451 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 TEX261Q6UWH6 196 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 B3GLCTQ6Y288 498 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 TRAPPC5Q8IUR0 188 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 TIGD4Q8IY51 512 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 C2orf73Q8N5S3 287 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 OR5M3Q8NGP4 307 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 SECISBP2Q96T21 854 aaKnown RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 PRR14Q9BWN1 585 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 PPIL3Q9H2H8 161 aaKnown RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 ACSS1Q9NUB1 689 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 MGAT4AQ9UM21 535 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 EXOGQ9Y2C4 368 aaKnown RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 AUP1Q9Y679 476 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 U3KQ87 197 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 BTN3A3O00478 584 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 DHFRP00374 187 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 IGHA1P01876 353 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 GALP22466 123 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 TMEM44Q2T9K0 475 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 RAET1GQ6H3X3 334 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 LIPIQ6XZB0 460 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 THAP7Q9BT49 309 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 ACAT2Q9BWD1 397 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 ABCG5Q9H222 651 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 RHBGQ9H310 441 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 RANBP3Q9H6Z4 567 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-202ENST00000375299 BCL2L10Q9HD36 194 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 EMC7Q9NPA0 242 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 ZFP64Q9NPA5 681 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 CNIH4Q9P003 139 aa19.86■□□□□ 0.77
UPF3A-202ENST00000375299 C7orf66A4D0T2 115 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 KIAA1161Q6NSJ0 714 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 LRRC28Q86X40 367 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 TMEM25Q86YD3 366 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 OTUB1Q96FW1 271 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 HHIPL1Q96JK4 782 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 CYSLTR2Q9NS75 346 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 TEX10Q9NXF1 929 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 NUP50Q9UKX7 468 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 PLAGL1Q9UM63 463 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 DVL2O14641 736 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 LZTS3O60299 673 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-202ENST00000375299 CH25HO95992 272 aa19.85■□□□□ 0.77
UPF3A-202ENST00000375299 CTSLP07711 333 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms