RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 ARHGEF17Q96PE2 2063 aaPredicted RBP12.33□□□□□ -0.44
CLGN-201ENST00000325617 TSC22D2O75157 780 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 ADH5P11766 374 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 IFI30P13284 250 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 PTPN2P17706 415 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 MAT2AP31153 395 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 RFX3P48380 749 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 MLLT11Q13015 90 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 SLAIN1Q8ND83 568 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 OR4Q3Q8NH05 313 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 PCNPQ8WW12 178 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 SLC7A6Q92536 515 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 ZBED6CLQ96FA7 236 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 AHSPQ9NZD4 102 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 SERGEFQ9UGK8 458 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 TBXA2RP21731 343 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 AHRP35869 848 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 TRIM23P36406 574 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 CSNK1G2P78368 415 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 ZNF234Q14588 700 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 KCTD7Q96MP8 289 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 INSM2Q96T92 566 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 SLC6A17Q9H1V8 727 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 CCDC86Q9H6F5 360 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 C3orf14Q9HBI5 128 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 GALNT9Q9HCQ5 603 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 SPHK1Q9NYA1 384 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 P2RX2Q9UBL9 471 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 TESQ9UGI8 421 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 ITGB1BP2Q9UKP3 347 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 ZIC2O95409 532 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 MRPL3P09001 348 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 KELP23276 732 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 S100A1P23297 94 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 MTNR1AP48039 350 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 CCR8P51685 355 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 SLC16A1P53985 500 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 WNT4P56705 351 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 NUDT13Q86X67 352 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 NRMQ8IXM6 262 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 Q8N402 240 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 YIPF7Q8N8F6 280 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 TRIM43Q96BQ3 446 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 FUZQ9BT04 418 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 DDX31Q9H8H2 851 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 SLC35C2Q9NQQ7 365 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 ICKQ9UPZ9 632 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 CHST2Q9Y4C5 530 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 PCDHGB2Q9Y5G2 931 aa12.32□□□□□ -0.44
CLGN-201ENST00000325617 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
CLGN-201ENST00000325617 GTPBP1O00178 669 aaKnown RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 POLR1CO15160 346 aaPredicted RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 LANCL1O43813 399 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 SYPP08247 313 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 GKN3PP0CG01 181 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 NR2F6P10588 404 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 ENDOUP21128 410 aaKnown RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 RPL3P39023 403 aaKnown RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 BCL6P41182 706 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 ZNF311Q5JNZ3 666 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 OR4C11Q6IEV9 310 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 RRM2BQ7LG56 351 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 NR2C2APQ86WQ0 139 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 OR51G2Q8NGK0 314 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 RGMAQ96B86 450 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 PPIL3Q9H2H8 161 aaKnown RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLGN-201ENST00000325617 TBX21Q9UL17 535 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 MAPRE3Q9UPY8 281 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 SF3B6Q9Y3B4 125 aaKnown RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 TBC1D3BA6NDS4 549 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 REM1O75628 298 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 PIPP12273 146 aaPredicted RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 CCL5P13501 91 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 P2RY2P41231 377 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 TATDN3Q17R31 274 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 WSCD2Q2TBF2 565 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 ARHGAP15Q53QZ3 475 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 FAM46CQ5VWP2 391 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 FAM92BQ6ZTR7 304 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 DCUN1D3Q8IWE4 304 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 KLHDC8AQ8IYD2 350 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 KCT2Q8NC54 265 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 POF1BQ8WVV4 589 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 SPRYD4Q8WW59 207 aaPredicted RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 MTERF3Q96E29 417 aa12.31□□□□□ -0.44
CLGN-201ENST00000325617 DIMT1Q9UNQ2 313 aaKnown RBP12.31□□□□□ -0.44
CLGN-201ENST00000325617 ZNF860A6NHJ4 632 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms