RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CMPK1P30085 196 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 S100A5P33763 92 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 MPIP34949 423 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TRHRP34981 398 aaPredicted RBP11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 AHRP35869 848 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ID2Q02363 134 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SYT14P1Q58G82 188 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ZNF425Q6IV72 752 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 C19orf48Q6RUI8 117 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 FAM111BQ6SJ93 734 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SHFQ7M4L6 423 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PRICKLE2Q7Z3G6 844 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 FRMD1Q8N878 549 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 POC5Q8NA72 575 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ARSGQ96EG1 525 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ZNF681Q96N22 645 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 POLR2J2Q9GZM3 115 aaKnown RBP11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 NUAK2Q9H093 628 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TMEM168Q9H0V1 697 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 BCL2L10Q9HD36 194 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 NDOR1Q9UHB4 597 aa11.08□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ZNF860A6NHJ4 632 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 CH25HO95992 272 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 NTSR1P30989 418 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 CSTF2P33240 577 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 RPS19P39019 145 aaKnown RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PCYT1AP49585 367 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SMIM11AP58511 58 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TAS2R41P59536 307 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TGM3Q08188 693 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SNAPC1Q16533 368 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 DEFB134Q4QY38 66 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 MFSD4BQ5TF39 518 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SFTPA2Q8IWL1 248 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 BBS10Q8TAM1 723 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SEMA4GQ9NTN9 838 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ZSCAN9O15535 394 aaPredicted RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SCG5P05408 212 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 HOXB2P14652 356 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ACSL1P33121 698 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ACTR1BP42025 376 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 GSTM5P46439 218 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PDX1P52945 283 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ACTR1AP61163 376 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ABATP80404 500 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SIM1P81133 766 aaPredicted RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PRR5P85299 388 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 MXD1Q05195 221 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 DLX2Q07687 328 aaPredicted RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 MFSD9Q8NBP5 474 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 OR7G2Q8NG99 324 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 FAM46AQ96IP4 442 aaKnown RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PRRC1Q96M27 445 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 OR2M4Q96R27 311 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 NXF2Q9GZY0 626 aaKnown RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ZNF780BQ9Y6R6 833 aa11.07□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SMIM30A4D0T7 59 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 EMC8O43402 210 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 CTSVO60911 334 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 KLF8O95600 359 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 EGFP01133 1207 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PIPP12273 146 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SPNP16150 400 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TEAD1P28347 426 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ETV5P41161 510 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ETV1P50549 477 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TMEM201Q5SNT2 666 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 OR2G6Q5TZ20 316 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 C1orf94Q6P1W5 598 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 FBXO42Q6P3S6 717 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 BHLHB9Q6PI77 547 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 TMEM64Q6YI46 380 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 C16orf62Q7Z3J2 963 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 NKAIN4Q8IVV8 208 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 OR8D4Q8NGM9 314 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 OR10G6Q8NH81 332 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PATE1Q8WXA2 126 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SLC9A6Q92581 669 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SLC35A4Q96G79 324 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SPATA5L1Q9BVQ7 753 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ASPNQ9BXN1 380 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 BARHL1Q9BZE3 327 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 NKX2-4Q9H2Z4 354 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 SRMSQ9H3Y6 488 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 RMI1Q9H9A7 625 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 C14orf119Q9NWQ9 140 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ZSCAN32Q9NX65 697 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 ERVK13-1Q9NX77 482 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 YARS2Q9Y2Z4 477 aaKnown RBP11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 COLEC10Q9Y6Z7 277 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 A0A0G2JPF8 293 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 CENPVL1A0A0U1RR11 272 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 HNRNPCL2B2RXH8 293 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 HNRNPCL3B7ZW38 293 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 RGS5O15539 181 aa11.06□□□□□ -0.64
HMGN3-AS1-201ENST00000604516 P2RX6O15547 441 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms