RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 UFM1P61960 85 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 MRPS22P82650 360 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 PLCXD2Q0VAA5 305 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 DUSP8Q13202 625 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 NTRK2Q16620 822 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 FAM174BQ3ZCQ3 159 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC22A10Q63ZE4 541 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR4F3Q6IEY1 312 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZCCHC12Q6PEW1 402 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 GALNTL5Q7Z4T8 443 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC34A3Q8N130 599 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 CISD2Q8N5K1 135 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 POGLUT1Q8NBL1 392 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SIMC1Q8NDZ2 872 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR56A1Q8NGH5 318 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 PSMA8Q8TAA3 256 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SFXN5Q8TD22 340 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 VSTM2LQ96N03 204 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 MS4A4EQ96PG1 132 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SECISBP2Q96T21 854 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ANKRA2Q9H9E1 313 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 Q9N2J8 555 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 SDR39U1Q9NRG7 319 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZCCHC3Q9NUD5 404 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 MRGBPQ9NV56 204 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 CNIH4Q9P003 139 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 NTMQ9P121 344 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 DTX4Q9Y2E6 619 aa11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC1-206ENST00000573989 A0A0G2JND7 137 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 TO15178 435 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 PPM1BO75688 479 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 PSMG1O95456 288 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 PGRP06401 933 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 ABCB1P08183 1280 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 KRT16P08779 473 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 EFNA1P20827 205 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 IL12BP29460 328 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 CCT3P49368 545 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 CDK9P50750 372 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 TP53BP2Q13625 1128 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 NNATQ16517 81 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF791Q3KP31 576 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 CYP27C1Q4G0S4 372 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 TBCELQ5QJ74 424 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMEM198Q66K66 360 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMEM64Q6YI46 380 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 MDGA2Q7Z553 956 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC44A2Q8IWA5 706 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 TRIML2Q8N7C3 387 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 CDRT4Q8N9R6 151 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR4A15Q8NGL6 344 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 SNRNP40Q96DI7 357 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 OMA1Q96E52 524 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 FAM120BQ96EK7 910 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 MARK4Q96L34 752 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR52E6Q96RD3 313 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 EQTNQ9NQ60 294 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 DCTN4Q9UJW0 460 aa11.77□□□□□ -0.53
TRAPPC1-206ENST00000573989 NINQ8N4C6 2090 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 PEX1O43933 1283 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF354AO60765 605 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 REM1O75628 298 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 KCNH1O95259 989 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 CT45A8P0DMV1 189 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 CT45A9P0DMV2 189 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 CNR1P21554 472 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 SOAT1P35610 550 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 MRPL19P49406 292 aaKnown RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 MEOX1P50221 254 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 HBA1P69905 142 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 PSG6Q00889 435 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 EFR3AQ14156 821 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 DECR1Q16698 335 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 CT45A2Q5DJT8 189 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 GK5Q6ZS86 529 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 MSANTD1Q6ZTZ1 278 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 NUP54Q7Z3B4 507 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF227Q86WZ6 799 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 SULF2Q8IWU5 870 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 PRR22Q8IZ63 422 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 FBXW8Q8N3Y1 598 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR5M3Q8NGP4 307 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 GRHL3Q8TE85 626 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 PAQR8Q8TEZ7 354 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 FAR1Q8WVX9 515 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 DIO2Q92813 273 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMCO6Q96DC7 493 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 CHMP6Q96FZ7 201 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 FAM173AQ9BQD7 235 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 LMF2Q9BU23 707 aaKnown RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 HES7Q9BYE0 225 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms