RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 LYPLA1O75608 230 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 ATP6AP2O75787 350 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 CHRNGP07510 517 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 PRF1P14222 555 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 DDCP20711 480 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 GRK2P25098 689 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 ARRB2P32121 409 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SLC1A6P48664 564 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TMED10P49755 219 aaKnown RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SMSP52788 366 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 HEPACAMQ14CZ8 416 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 KIAA0040Q15053 153 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF630Q2M218 657 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SPDYAQ5MJ70 313 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 HLA-DQA1Q5Y7H0 255 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 KANK2Q63ZY3 851 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 DESI1Q6ICB0 168 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 FAM71E1Q6IPT2 247 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 XKRXQ6PP77 449 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TICAM1Q8IUC6 712 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 CCDC116Q8IYX3 515 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SLC34A3Q8N130 599 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 OR5M3Q8NGP4 307 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF597Q96LX8 424 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 RILPQ96NA2 401 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 BTBD9Q96Q07 612 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SECISBP2Q96T21 854 aaKnown RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TRMOQ9BU70 441 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 DOHHQ9BU89 302 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 ANGPTL4Q9BY76 406 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SLC6A15Q9H2J7 730 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 UBQLN3Q9H347 655 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TP63Q9H3D4 680 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 CCDC134Q9H6E4 229 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 SLC35C2Q9NQQ7 365 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 PNPLA3Q9NST1 481 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TNFRSF10DQ9UBN6 386 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 BCAP29Q9UHQ4 241 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 PSME2Q9UL46 239 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 BOKQ9UMX3 212 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 FAM215AQ9Y5M1 114 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 PHF3Q92576 2039 aaKnown RBP9.47□□□□□ -0.89
SHMT2-224ENST00000556737 CSMD2Q7Z408 3487 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 PCNX1Q96RV3 2341 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 LRBAP50851 2863 aa9.46□□□□□ -0.89
SHMT2-224ENST00000556737 OR14I1A6ND48 311 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 FRG2CA6NGY1 282 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 MYO1GB0I1T2 1018 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 TMEM233B4DJY2 109 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NPIPA2E9PIF3 369 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NPIPA3F8WFD2 350 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NDUFAB1O14561 156 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 AZIN1O14977 448 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 ACOX3O15254 700 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 SUSD5O60279 629 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 SHOX2O60902 331 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NME6O75414 186 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 PPM1BO75688 479 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 PSMG1O95456 288 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 CLDN14O95500 239 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 ABCB1P08183 1280 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 TROVE2P10155 538 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 KITP10721 976 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 TACR1P25103 407 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 HTR1EP28566 365 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 PTGDSP41222 190 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 CASP3P42574 277 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NRG3P56975 720 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 ABCE1P61221 599 aaKnown RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 PLCXD2Q0VAA5 305 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 IMPG1Q17R60 797 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 TBCELQ5QJ74 424 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 RTL6Q6ICC9 239 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NOXRED1Q6NXP6 359 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 TMEM81Q6P7N7 255 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NPSR1Q6W5P4 371 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 Q6ZSR9 355 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 IKBIPQ70UQ0 350 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 SAMD14Q8IZD0 417 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 FAM9CQ8IZT9 166 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 OR7G2Q8NG99 324 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 OR5M9Q8NGP3 310 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 OR6Y1Q8NGX8 325 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 CDC26Q8NHZ8 85 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 AGR3Q8TD06 166 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 RNF138Q8WVD3 245 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 DIO2Q92813 273 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 KAT2AQ92830 837 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 MARVELD3Q96A59 401 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 ERP27Q96DN0 273 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 OMA1Q96E52 524 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 HSPBAP1Q96EW2 488 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 THOC1Q96FV9 657 aaKnown RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 LCORQ96JN0 433 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 VSTM2LQ96N03 204 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 NODALQ96S42 347 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 EML4Q9HC35 981 aaKnown RBP9.46□□□□□ -0.9
SHMT2-224ENST00000556737 SLCO1B3Q9NPD5 702 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 PFDN4Q9NQP4 134 aa9.46□□□□□ -0.9
SHMT2-224ENST00000556737 THAP1Q9NVV9 213 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms