RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MPC1LP0DKB6 136 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 BCKDHAP12694 445 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 HOXB2P14652 356 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CPEP16870 476 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 GABRG2P18507 467 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 HIST1H2ADP20671 130 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 AGXTP21549 392 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ENPP1P22413 925 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 PTBP1P26599 531 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 HOXD9P28356 352 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 PCGF2P35227 344 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 DDOSTP39656 456 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CSNK1DP48730 415 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CLK3P49761 638 aaKnown RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 AGTR2P50052 363 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 HK3P52790 923 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 DGKQP52824 942 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 RAB25P57735 213 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CDC42P60953 191 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 RUNX1T1Q06455 604 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 FOXL1Q12952 345 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 SELENBP1Q13228 472 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 RIN1Q13671 783 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CDSNQ15517 529 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 UGT8Q16880 541 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TIGD6Q17RP2 521 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 HKDC1Q2TB90 917 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 C10orf120Q5SQS8 335 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 MEDAGQ5VYS4 303 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 LIPJQ5W064 366 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TAS2R42Q7RTR8 314 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 MSRB3Q8IXL7 192 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ZBTB2Q8N680 514 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 DEFB119Q8N690 84 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 NATD1Q8N6N6 113 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 L3MBTL4Q8NA19 623 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 LSM14AQ8ND56 463 aaKnown RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 LPCAT1Q8NF37 534 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 OR2I1PQ8NGU4 316 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CNIH3Q8TBE1 160 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 GCDHQ92947 438 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 IGSF8Q969P0 613 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 OTUB2Q96DC9 234 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 AHCYL2Q96HN2 611 aaKnown RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CEP19Q96LK0 163 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 WDFY2Q96P53 400 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 OR14A2Q96R54 314 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ACOX2Q99424 681 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 EGFL8Q99944 293 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 H2AFJQ9BTM1 129 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TTLL2Q9BWV7 592 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 NUAK2Q9H093 628 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ELOVL6Q9H5J4 265 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 SLA2Q9H6Q3 261 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TMEM165Q9HC07 324 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 THSD1Q9NS62 852 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 THUMPD1Q9NXG2 353 aaKnown RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 SLC25A37Q9NYZ2 338 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 PDP1Q9P0J1 537 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 IL17CQ9P0M4 197 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 DKK3Q9UBP4 350 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF282Q9UDV7 671 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 KLQ9UEF7 1012 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 IKZF3Q9UKT9 509 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 RUVBL1Q9Y265 456 aaKnown RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ITM2BQ9Y287 266 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 BTBD3Q9Y2F9 522 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 RAI2Q9Y5P3 530 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 DMXL2Q8TDJ6 3036 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 AKAP13Q12802 2813 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 PCDH15Q96QU1 1955 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF840PA6NDX5 716 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CENPXA8MT69 81 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 MAGEB17A8MXT2 336 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 MYO1GB0I1T2 1018 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 C9JVG2 144 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CLIC1O00299 241 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CCRL2O00421 344 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 FLRT2O43155 660 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 NIPSNAP2O75323 286 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CCNKO75909 580 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF682O95780 498 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 OLFM2O95897 454 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 LGI1O95970 557 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 VSIG10L2P0DP72 767 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CYP2A7P20853 494 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ACRV1P26436 265 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 PRDX3P30048 256 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CD6P30203 668 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 NTSR1P30989 418 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 ATP5C1P36542 298 aaKnown RBP5.59□□□□□ -1.51
VPS33B-203ENST00000554264 HNF4AP41235 474 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 CASP3P42574 277 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 NSG1P42857 185 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 KIR2DL3P43628 341 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 SLC15A1P46059 708 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 DAPP51397 102 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 VBP1P61758 197 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 NCS1P62166 190 aa5.59□□□□□ -1.51
VPS33B-203ENST00000554264 RPP38P78345 283 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms