RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TBC1D10CQ8IV04 446 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 TMEM178AQ8NBL3 297 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 OR52J3Q8NH60 311 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 SMAP2Q8WU79 429 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-208ENST00000553278 COQ2Q96H96 371 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 SGK2Q9HBY8 427 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 FAM114A2Q9NRY5 505 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 LNPEPQ9UIQ6 1025 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 CDH9Q9ULB4 789 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCFD1-208ENST00000553278 C2CD2Q9Y426 696 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 CACNA1IQ9P0X4 2223 aa4.99□□□□□ -1.61
SCFD1-208ENST00000553278 NPIPA5A0A0B4J1W7 369 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 LRIT2A6NDA9 550 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 OR52A4PA6NMU1 304 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 LACTBL1A8MY62 500 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 NPIPA5E9PKD4 350 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 NEDD8-MDP1E9PL57 170 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 INPP4BO15327 924 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 DUX1O43812 170 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 ASGR1P07306 291 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 SLC2A3P11169 496 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 ANXA3P12429 323 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 LEPRP48357 1165 aaKnown RBP4.98□□□□□ -1.61
SCFD1-208ENST00000553278 PGFP49763 221 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 PLA2G16P53816 162 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 CSTF1Q05048 431 aaKnown RBP4.98□□□□□ -1.61
SCFD1-208ENST00000553278 PLD1Q13393 1074 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 IZUMO4Q1ZYL8 232 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 C10orf120Q5SQS8 335 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 NEPROQ6NW34 567 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 PRSS57Q6UWY2 283 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.98□□□□□ -1.615e-10■■■□□ 14.9
SCFD1-208ENST00000553278 RAB42Q8N4Z0 105 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 CHDHQ8NE62 594 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-208ENST00000553278 OR5D13Q8NGL4 314 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 AGR3Q8TD06 166 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 RPL3LQ92901 407 aaKnown RBP4.98□□□□□ -1.61
SCFD1-208ENST00000553278 CFAP53Q96M91 514 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 NPY6RQ99463 290 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 HOXD1Q9GZZ0 328 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 PLEKHA3Q9HB20 300 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 C2orf42Q9NWW7 574 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 DUS2Q9NX74 493 aaKnown RBP4.98□□□□□ -1.61
SCFD1-208ENST00000553278 PIPOXQ9P0Z9 390 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 MBD2Q9UBB5 411 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 EIF3KQ9UBQ5 218 aaKnown RBP4.98□□□□□ -1.61
SCFD1-208ENST00000553278 SEC14L3Q9UDX4 400 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 LCMT1Q9UIC8 334 aa4.98□□□□□ -1.61
SCFD1-208ENST00000553278 IGHV4-4A0A075B6R2 117 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 A0A0A6YYD4 124 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ARHGEF35A5YM69 484 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ZNF195O14628 629 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 TNFSF12O43508 249 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 TOXO94900 526 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 AP2A2O94973 939 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 NADKO95544 446 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 CRYAAP02489 173 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 CCR1P32246 355 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 TSFMP43897 325 aaKnown RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 PAX9P55771 341 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ITPK1Q13572 414 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 GANABQ14697 944 aaKnown RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ARMC12Q5T9G4 340 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 PRAMEF20Q5VT98 475 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 SLC35E4Q6ICL7 350 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 C9orf139Q6ZV77 190 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 RBM23Q86U06 439 aaKnown RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 TMEM17Q86X19 198 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 HOGA1Q86XE5 327 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 NANPQ8TBE9 248 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 SLC2A14Q8TDB8 520 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 NUDCD2Q8WVJ2 157 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 PIGCQ92535 297 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 DLX4Q92988 240 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ADIPOR1Q96A54 375 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ZNF486Q96H40 463 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 ZNF778Q96MU6 729 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 FAM218AQ96MZ4 157 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 TGM7Q96PF1 710 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 RIT2Q99578 217 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 FUCA2Q9BTY2 467 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 FAM192AQ9GZU8 254 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 Q9HAA7 133 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 GLRX2Q9NS18 164 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 UFSP2Q9NUQ7 469 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 DCAF13Q9NV06 445 aaKnown RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 GNG12Q9UBI6 72 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 EMCNQ9ULC0 261 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 EIF3LQ9Y262 564 aaKnown RBP4.97□□□□□ -1.61
SCFD1-208ENST00000553278 DHRS7Q9Y394 339 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 PCDHGB1Q9Y5G3 927 aa4.97□□□□□ -1.61
SCFD1-208ENST00000553278 A0A1W2PR80 420 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 CASKO14936 926 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 STX7O15400 261 aaKnown RBP4.96□□□□□ -1.62
SCFD1-208ENST00000553278 ZNF264O43296 627 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 FGF17O60258 216 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 DUSP11O75319 330 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms