RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 RNF138Q8WVD3 245 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 HOXB13Q92826 284 aaPredicted RBP7.71□□□□□ -1.18
SPARC-208ENST00000538026 ELP4Q96EB1 424 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 LCORQ96JN0 433 aaPredicted RBP7.71□□□□□ -1.18
SPARC-208ENST00000538026 BTBD9Q96Q07 612 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 NODALQ96S42 347 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 FAM173AQ9BQD7 235 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 RTN4RQ9BZR6 473 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 SACM1LQ9NTJ5 587 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 FLRT3Q9NZU0 649 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 SPRR3Q9UBC9 169 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 TNFRSF10DQ9UBN6 386 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 BCAP29Q9UHQ4 241 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 WBP11Q9Y2W2 641 aaKnown RBP7.71□□□□□ -1.18
SPARC-208ENST00000538026 ZNF780BQ9Y6R6 833 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.71□□□□□ -1.18
SPARC-208ENST00000538026 HEATR5AQ86XA9 2040 aa7.71□□□□□ -1.18
SPARC-208ENST00000538026 DOCK7Q96N67 2140 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 HCFC1P51610 2035 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 A0A087WV62 115 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 TRGV8A0A0C4DH27 118 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 A0A1B0GVC2 190 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 TMEM120BA0PK00 339 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ANKRD33BA6NCL7 494 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 C2orf72A6NCS6 295 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 DYRK3O43781 588 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 SNNO75324 88 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 SKAP2O75563 359 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 PPM1BO75688 479 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ZWINTO95229 277 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 IGHG3P01860 377 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 LAMP1P11279 417 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 CASP3P42574 277 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 GSTM5P46439 218 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 SLC1A6P48664 564 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 NCBP2P52298 156 aaKnown RBP eCLIP7.7□□□□□ -1.18
SPARC-208ENST00000538026 GAS1P54826 345 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 MAGOHP61326 146 aaKnown RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 GAB1Q13480 694 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 PTGR1Q14914 329 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 TMEM107Q6UX40 140 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 FAM47EQ6ZV65 393 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 IKBIPQ70UQ0 350 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 TRILQ7L0X0 811 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 DDIASQ8IXT1 998 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 OR2L13Q8N349 312 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 FAM13CQ8NE31 585 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 OR7A2PQ8NGA2 310 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 SLC22A8Q8TCC7 542 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ITLN2Q8WWU7 325 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 TMBIM1Q969X1 311 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 OMA1Q96E52 524 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 GIMAP5Q96F15 307 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ZNF764Q96H86 408 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 CCDC120Q96HB5 630 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 GNRHR2Q96P88 292 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 BBS4Q96RK4 519 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 DMRTA2Q96SC8 542 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 CCT7Q99832 543 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 C1orf50Q9BV19 199 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ANGPTL4Q9BY76 406 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 UBQLN3Q9H347 655 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 REEP4Q9H6H4 257 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 ZNF703Q9H7S9 590 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 AKTIPQ9H8T0 292 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 IL1RL2Q9HB29 575 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 FOLH1BQ9HBA9 442 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 KCNK9Q9NPC2 374 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 SIRT3Q9NTG7 399 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.7□□□□□ -1.18
SPARC-208ENST00000538026 NTMQ9P121 344 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 PLEKHB1Q9UF11 243 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 ATP6V1HQ9UI12 483 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 SH3BGRL2Q9UJC5 107 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 C19orf53Q9UNZ5 99 aaPredicted RBP7.7□□□□□ -1.18
SPARC-208ENST00000538026 AKAP6Q13023 2319 aa7.7□□□□□ -1.18
SPARC-208ENST00000538026 GXYLT2A0PJZ3 443 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 FRG2CA6NGY1 282 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 KDM4EB2RXH2 506 aaPredicted RBP7.69□□□□□ -1.18
SPARC-208ENST00000538026 TMEM114B3SHH9 223 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 CCL21O00585 134 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 ZNF195O14628 629 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 TFECO14948 347 aaPredicted RBP7.69□□□□□ -1.18
SPARC-208ENST00000538026 ANKRD28O15084 1053 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 IGKV1D-16P01601 117 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 C1QCP02747 245 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 P04436 131 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 G6PDP11413 515 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 NEFHP12036 1026 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 GP1BBP13224 206 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 H2AFXP16104 143 aaPredicted RBP7.69□□□□□ -1.18
SPARC-208ENST00000538026 NAGAP17050 411 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 GRNP28799 593 aaKnown RBP7.69□□□□□ -1.18
SPARC-208ENST00000538026 MPIP34949 423 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 SLC18A1P54219 525 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 DIO3P55073 304 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 WNT3P56703 355 aa7.69□□□□□ -1.18
SPARC-208ENST00000538026 PHC1P78364 1004 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms