RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ABOP16442 354 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 WDR4P57081 412 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 ABCE1P61221 599 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 RPL38P63173 70 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 KCNJ2P63252 427 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 RPS6KA2Q15349 733 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 GXYLT1Q4G148 440 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 ZNF385BQ569K4 471 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 EMC4Q5J8M3 183 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 TBCELQ5QJ74 424 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 FNDC7Q5VTL7 733 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 BICRALQ6AI39 1079 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 ARHGAP11AQ6P4F7 1023 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 TRILQ7L0X0 811 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 MAMDC2Q7Z304 686 aaPredicted RBP14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 FAM109AQ8N4B1 249 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 FAM57AQ8TBR7 257 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 ITLN2Q8WWU7 325 aaPredicted RBP14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 OMA1Q96E52 524 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 BTBD9Q96Q07 612 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 STMN4Q9H169 189 aaPredicted RBP14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 FOLH1BQ9HBA9 442 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 TMBIM4Q9HC24 238 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 MEMO1Q9Y316 297 aa14.8□□□□□ -0.04
PDLIM5-212ENST00000509333 FRG2CA6NGY1 282 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 LRRC3CA6NJW4 275 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 TMEM114B3SHH9 223 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ACOT7O00154 380 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 UPK1AO00322 258 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SUSD5O60279 629 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 UGT2B11O75310 529 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SLITRK5O94991 958 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 FREM3P0C091 2139 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 MYZAPP0CAP1 466 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ESRRAP11474 423 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 BGNP21810 368 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 GRK2P25098 689 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 COL8A1P27658 744 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 FRKP42685 505 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SLC1A6P48664 564 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SLC18A1P54219 525 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 CORO7P57737 925 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ADORA2A-AS1P86434 159 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 PDE7AQ13946 482 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 NNATQ16517 81 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 TMEM198Q66K66 360 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ANKRD26P1Q6NSI1 321 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 MTFR2Q6P444 385 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 TMEM81Q6P7N7 255 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 NPSR1Q6W5P4 371 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ZNF551Q7Z340 670 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 MRGPRGQ86SM5 289 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SLC34A3Q8N130 599 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 PPP1R14CQ8TAE6 165 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 TMBIM1Q969X1 311 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 NODALQ96S42 347 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 DMRTA2Q96SC8 542 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SORT1Q99523 831 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 DOHHQ9BU89 302 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ACKR4Q9NPB9 350 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 TAS2R9Q9NYW1 312 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 SH3BP4Q9P0V3 963 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 ATP6V1HQ9UI12 483 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 BOKQ9UMX3 212 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 RAP2CQ9Y3L5 183 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 NBPF19A0A087WUL8 3843 aa14.79□□□□□ -0.04
PDLIM5-212ENST00000509333 CENPEQ02224 2701 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 OR6C70A6NIJ9 312 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 E9PLN8 166 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 TSPAN2O60636 221 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 ERN1O75460 977 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 REM1O75628 298 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 PSMG1O95456 288 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 HSPA4LO95757 839 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 IFI6P09912 130 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 PTGDSP41222 190 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 MC3RP41968 323 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 ASMTP46597 345 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 TMED10P49755 219 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 RPL14P50914 215 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 RPP38P78345 283 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 PSG6Q00889 435 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 STX3Q13277 289 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 GAB1Q13480 694 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 IL23RQ5VWK5 629 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 TIGD3Q6B0B8 471 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 TMEM107Q6UX40 140 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 OR2L13Q8N349 312 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 ZNF781Q8N8C0 355 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 OR4N2Q8NGD1 307 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 CLHC1Q8NHS4 586 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 NUDT8Q8WV74 236 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 CIDECQ96AQ7 238 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 PPCDCQ96CD2 204 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 TLCD1Q96CP7 247 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 MTERF3Q96E29 417 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 RILPQ96NA2 401 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 GNRHR2Q96P88 292 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 VKORC1Q9BQB6 163 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 QPCTLQ9NXS2 382 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms