RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ONECUT1Q9UBC0 465 aa2.77□□□□□ -1.97
RBM28-207ENST00000488249 DAPK2Q9UIK4 370 aa2.77□□□□□ -1.97
RBM28-207ENST00000488249 STAP1Q9ULZ2 295 aa2.77□□□□□ -1.97
RBM28-207ENST00000488249 MRPS33Q9Y291 106 aaKnown RBP2.77□□□□□ -1.97
RBM28-207ENST00000488249 ADCY9O60503 1353 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TTC21AQ8NDW8 1320 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 A0A0J9YYE9 177 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 FAM240BA0A1B0GVZ2 78 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 FOXE1O00358 373 aaPredicted RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 ABCD4O14678 606 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 RNF13O43567 381 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 DFFBO76075 338 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 ZFAND5O76080 213 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 LCA5LO95447 670 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MBD3O95983 291 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TRBC1P01850 177 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MBP02144 154 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 CAPN1P07384 714 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 STAG3L1P0CL83 205 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SMIM18P0DKX4 95 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 IGHV4-31P0DP07 118 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MSR1P21757 451 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MAT2AP31153 395 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 ADRA1AP35348 466 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MNDAP41218 407 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 GRIA1P42261 906 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 CBX5P45973 191 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SLC1A6P48664 564 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TUFMP49411 452 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 BCAP31P51572 246 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 ZNF75DP51815 510 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MAZP56270 477 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 HNRNPKP61978 463 aaKnown RBP eCLIP2.76□□□□□ -1.97
RBM28-207ENST00000488249 POLR2GP62487 172 aaKnown RBP eCLIP2.76□□□□□ -1.97
RBM28-207ENST00000488249 SKP1P63208 163 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MAT1AQ00266 395 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 HSF2Q03933 536 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MERTKQ12866 999 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TNK1Q13470 666 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 NONOQ15233 471 aaKnown RBP eCLIP2.76□□□□□ -1.97
RBM28-207ENST00000488249 SSX2Q16385 188 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MAPK6Q16659 721 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 RGS21Q2M5E4 152 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TEX44Q53QW1 395 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SYT14P1Q58G82 188 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 RABGAP1LQ5R372 815 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SAPCD1Q5SSQ6 148 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 THEM4Q5T1C6 240 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.76□□□□□ -1.97
RBM28-207ENST00000488249 SPOUT1Q5T280 376 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 C20orf194Q5TEA3 1177 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 PRAMEF5Q5TYX0 476 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 PRAMEF6Q5VXH4 476 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TXNRD3NBQ6F5E7 133 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TWF2Q6IBS0 349 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 SLC25A25Q6KCM7 469 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TTC27Q6P3X3 843 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 FAM198BQ6UWH4 519 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 Q6ZSR9 355 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 PAQR9Q6ZVX9 377 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 CYP4V2Q6ZWL3 525 aaPredicted RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 PHLDB2Q86SQ0 1253 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 ECHDC2Q86YB7 292 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MISPQ8IVT2 679 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 CCDC60Q8IWA6 550 aaPredicted RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 UBQLNLQ8IYU4 475 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 EID3Q8N140 333 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MARVELD2Q8N4S9 558 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 BCORP1Q8N888 145 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 AMER3Q8N944 861 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 OR11H4Q8NGC9 324 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 OR4K14Q8NGD5 310 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 OR52N5Q8NH56 324 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 DQX1Q8TE96 717 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 PIGBQ92521 554 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 DYRK2Q92630 601 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 RAD54LQ92698 747 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TOP1MTQ969P6 601 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MCUR1Q96AQ8 359 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SLCO4A1Q96BD0 722 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 OPTNQ96CV9 577 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 FAM122AQ96E09 287 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SENP8Q96LD8 212 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 PRRC1Q96M27 445 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 LINC00479Q96M42 142 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 NPY6RQ99463 290 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SEPHS2Q99611 448 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SPAG8Q99932 426 aaPredicted RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 OPRPNQ99935 248 aaPredicted RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 FAM213AQ9BRX8 229 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 URM1Q9BTM9 101 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 ALG12Q9BV10 488 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 PITPNM3Q9BZ71 974 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 UPF3BQ9BZI7 483 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 MIS12Q9H081 205 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 SIRPDQ9H106 197 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 MTIF3Q9H2K0 278 aaKnown RBP2.76□□□□□ -1.97
RBM28-207ENST00000488249 TMEM245Q9H330 911 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 CPVLQ9H3G5 476 aa2.76□□□□□ -1.97
RBM28-207ENST00000488249 TMEM231Q9H6L2 316 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms