RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 LGI4Q8N135 537 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 GHDCQ8N2G8 530 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 NATD1Q8N6N6 113 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 C11orf65Q8NCR3 313 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 FAM46DQ8NEK8 389 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 KTI12Q96EK9 354 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-202ENST00000432306 GPR137Q96N19 417 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 VPS35Q96QK1 796 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 PANX1Q96RD7 426 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 NIPSNAP1Q9BPW8 284 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 MND1Q9BWT6 205 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 TMEM38AQ9H6F2 299 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 NT5DC2Q9H857 520 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 TPT1P8Q9HAU6 139 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 SEPSECSQ9HD40 501 aaKnown RBP7.62□□□□□ -1.19
VTI1A-202ENST00000432306 AMBNQ9NP70 447 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 GIMAP4Q9NUV9 329 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 CLN6Q9NWW5 311 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 ING3Q9NXR8 418 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 WWOXQ9NZC7 414 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 MALT1Q9UDY8 824 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 PLEKHB1Q9UF11 243 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-202ENST00000432306 CD207Q9UJ71 328 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 TMPRSS11EQ9UL52 423 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 LIPT1Q9Y234 373 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 RWDD3Q9Y3V2 267 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 ASB4Q9Y574 426 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 CHD5Q8TDI0 1954 aa7.62□□□□□ -1.19
VTI1A-202ENST00000432306 A0A1W2PQ72 361 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ARL5CA6NH57 179 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 OR6C70A6NIJ9 312 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 C12orf71A8MTZ7 269 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 GAPDHSO14556 408 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 FFAR3O14843 346 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TEX28O15482 410 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 GPR42O15529 346 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CSO75390 466 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TNFRSF6BO95407 300 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ADAP00813 363 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ANXA5P08758 320 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PRG2P13727 222 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CFL1P23528 166 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 FGF9P31371 208 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 XCR1P46094 333 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RGRP47804 291 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SLC6A12P48065 614 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 IDH2P48735 452 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 NUDT6P53370 316 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 MVDP53602 400 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SLC16A1P53985 500 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CRISP1P54107 249 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ZXDAP98168 799 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PTSQ03393 145 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 MAB21L1Q13394 359 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ILKQ13418 452 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 VEPH1Q14D04 833 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RGNQ15493 299 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 MED22Q15528 200 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TATDN3Q17R31 274 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PRAMEF14Q5SWL7 426 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 DDI2Q5TDH0 399 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 LCN1P1Q5VSP4 162 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 NOXRED1Q6NXP6 359 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TRAT1Q6PIZ9 186 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CD200R1LQ6Q8B3 271 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 USP53Q70EK8 1073 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TRILQ7L0X0 811 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PHC2Q8IXK0 858 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SELENOMQ8WWX9 145 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 AP3S1Q92572 193 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CXorf40BQ96DE9 158 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TMEM80Q96HE8 168 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 DCLRE1CQ96SD1 692 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 COQ7Q99807 217 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CINPQ9BW66 212 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CIPCQ9C0C6 399 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 BHLHE41Q9C0J9 482 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PRDM8Q9NQV8 689 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 MRPS18AQ9NVS2 196 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 IMPAD1Q9NX62 359 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TNFRSF10DQ9UBN6 386 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ZNF282Q9UDV7 671 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SSR3Q9UNL2 185 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PCDHGA1Q9Y5H4 931 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 STON1Q9Y6Q2 735 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 MYO10Q9HD67 2058 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 A4D1N5 150 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 FABP12A6NFH5 140 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 FAM170BA6NMN3 283 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 METTL12A8MUP2 240 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 A8MV72 311 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PROB1E7EW31 1015 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RGS5O15539 181 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 HBQ1P09105 142 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ZDHHC11BP0C7U3 371 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CA8P35219 290 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ZNF81P51508 661 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CDH4P55283 916 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SRP54P61011 504 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms