RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 AKIRIN1Q9H9L7 192 aaPredicted RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 THUMPD1Q9NXG2 353 aaKnown RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 PMS2P1A4D2B8 440 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 GNGT2O14610 69 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 EI24O14681 340 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 ASNA1O43681 348 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 PRKNO60260 465 aaPredicted RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 FUT4P22083 530 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 ANXA11P50995 505 aaKnown RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 ZNF155Q12901 538 aaPredicted RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 OTUD3Q5T2D3 398 aaPredicted RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 ARMC8Q8IUR7 673 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 AGBL5Q8NDL9 886 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 BARD1Q99728 777 aaKnown RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 VN1R1Q9GZP7 353 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 FBXO34Q9NWN3 711 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 GIN1Q9NXP7 522 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 MKL2Q9ULH7 1088 aa15.82■□□□□ 0.12
CALD1-204ENST00000417172 GPC6Q9Y625 555 aaPredicted RBP15.82■□□□□ 0.12
CALD1-204ENST00000417172 DMXL1Q9Y485 3027 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 IGKV3D-11A0A0A0MRZ8 115 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 GXYLT2A0PJZ3 443 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 J3KTA2 159 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 RPSAP08865 295 aaKnown RBP15.81■□□□□ 0.12
CALD1-204ENST00000417172 ITIH1P19827 911 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 EMDP50402 254 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 NUBP1P53384 320 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 PUM1Q14671 1186 aaKnown RBP eCLIP15.81■□□□□ 0.12
CALD1-204ENST00000417172 CLPPQ16740 277 aaPredicted RBP15.81■□□□□ 0.12
CALD1-204ENST00000417172 NKAIN1Q4KMZ8 207 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 IFI44LQ53G44 452 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 EXOSC6Q5RKV6 272 aaKnown RBP15.81■□□□□ 0.12
CALD1-204ENST00000417172 FAAH2Q6GMR7 532 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 HEPHL1Q6MZM0 1159 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 CATSPER1Q8NEC5 780 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 NDUFAF4Q9P032 175 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 SEC14L3Q9UDX4 400 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 MKLN1Q9UL63 735 aa15.81■□□□□ 0.12
CALD1-204ENST00000417172 CENPVL1A0A0U1RR11 272 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 C17orf105B2RV13 164 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 EPPINO95925 133 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 CLPSP04118 112 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 FESP07332 822 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 ACADSP16219 412 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 TNNI3P19429 210 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 ATP6V1C1P21283 382 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 MAGEA8P43361 318 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 NNATQ16517 81 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 C6orf52Q5T4I8 152 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 ATAD3BQ5T9A4 648 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 ZNF385CQ66K41 422 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 QSOX2Q6ZRP7 698 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 LANCL3Q6ZV70 420 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 OR4D11Q8NGI4 311 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 PTPMT1Q8WUK0 201 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 APOBEC4Q8WW27 367 aaKnown RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 LZICQ8WZA0 190 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 AMBRA1Q9C0C7 1298 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 FOLH1BQ9HBA9 442 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 MMACHCQ9Y4U1 282 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 PCNX2A6NKB5 2137 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 DLGAP1O14490 977 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 POLR1CO15160 346 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 SLITRK5O94991 958 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 IFNA14P01570 189 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 ALOX5P09917 674 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 PRKACGP22612 351 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 GABRA3P34903 492 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 MAP3K8P41279 467 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 RNF144AP50876 292 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 FOXD4Q12950 439 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 TRA2AQ13595 282 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■■■ 43.4
CALD1-204ENST00000417172 ELOAQ14241 798 aaKnown RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 NSDHLQ15738 373 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 FAM69BQ5VUD6 431 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 OR2T5Q6IEZ7 315 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 PPP4R4Q6NUP7 873 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 FIGNL1Q6PIW4 674 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 FRRS1Q6ZNA5 592 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 VRK2Q86Y07 508 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 RBM45Q8IUH3 476 aaKnown RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 LACC1Q8IV20 430 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 CDRT4Q8N9R6 151 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 OR4N2Q8NGD1 307 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 OR2T29Q8NH02 315 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 VANGL1Q8TAA9 524 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 BBS10Q8TAM1 723 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 STT3BQ8TCJ2 826 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 GPR151Q8TDV0 419 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 ZNF607Q96SK3 696 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 MYCBPQ99417 103 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 LRFN3Q9BTN0 628 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 C9orf16Q9BUW7 83 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 PIGUQ9H490 435 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 SOX17Q9H6I2 414 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 BCL2L10Q9HD36 194 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 MKKSQ9NPJ1 570 aaPredicted RBP15.8■□□□□ 0.12
CALD1-204ENST00000417172 PADI2Q9Y2J8 665 aa15.8■□□□□ 0.12
CALD1-204ENST00000417172 DSPPQ9NZW4 1301 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms