RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 GRHL2Q6ISB3 625 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 WDR93Q6P2C0 686 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 MED27Q6P2C8 311 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 TRIM40Q6P9F5 258 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 SCIMPQ6UWF3 145 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 ZNF793Q6ZN11 406 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 TIFABQ6ZNK6 161 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 LINC00696Q6ZRV3 163 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 ASB18Q6ZVZ8 466 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CCDC91Q7Z6B0 441 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 ANKRD37Q7Z713 158 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CLNKQ7Z7G1 428 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 APLFQ8IW19 511 aaPredicted RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 LAS2Q8IYD9 372 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CCNYL1Q8N7R7 359 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 EIF1ADQ8N9N8 165 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 CCDC63Q8NA47 563 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CLEC1AQ8NC01 280 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 SIMC1Q8NDZ2 872 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 OR2L5Q8NG80 312 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 OR7G3Q8NG95 312 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 OR4F6Q8NGB9 312 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 OR52N2Q8NGI0 321 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 HUS1BQ8NHY5 278 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 TRPC4APQ8TEL6 797 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 PPP4R1Q8TF05 950 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 ZNF483Q8TF39 744 aaPredicted RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 ZNF473Q8WTR7 871 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 METTL21AQ8WXB1 218 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CAVIN3Q969G5 261 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 WDR34Q96EX3 536 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 WBP1Q96G27 269 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 SMIM10Q96HG1 83 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 FER1L6-AS2Q96M78 137 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 QRFPRQ96P65 431 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 TMEM237Q96Q45 408 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 KCNA7Q96RP8 456 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 TRIB1Q96RU8 372 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 HBEGFQ99075 208 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 MRPL57Q9BQC6 102 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 CAPS2Q9BXY5 557 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 SHCBP1LQ9BZQ2 653 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 SLC25A18Q9H1K4 315 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 ADNPQ9H2P0 1102 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CENPHQ9H3R5 247 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 EHD1Q9H4M9 534 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 COPS7BQ9H9Q2 264 aaPredicted RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 FARSBQ9NSD9 589 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 C14orf105Q9NVL8 296 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 PTGFRNQ9P2B2 879 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 LPAR3Q9UBY5 353 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 FETUBQ9UGM5 382 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 NXT1Q9UKK6 140 aaKnown RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 FBXW2Q9UKT8 454 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 CSAG2Q9Y5P2 127 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 HEMK1Q9Y5R4 338 aaPredicted RBP4.56□□□□□ -1.68
VPS41-205ENST00000414632 SLC22A7Q9Y694 548 aa4.56□□□□□ -1.68
VPS41-205ENST00000414632 IGHV1-45A0A0A0MS14 117 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 URADA6NGE7 173 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 A8MUI8 341 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 MAGEB17A8MXT2 336 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 B8ZZF3 427 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 G3V2L1 256 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 PSMD12O00232 456 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 PLPP1O14494 284 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 COPEO14579 308 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 STX16O14662 325 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 RGS10O43665 173 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 CDH16O75309 829 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 GLRA3O75311 464 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 EEDO75530 441 aaKnown RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 CLDN9O95484 217 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 HPP00738 406 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 PDYNP01213 254 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 NUDT17P0C025 328 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 MYL2P10916 166 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ITGAMP11215 1152 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 RNH1P13489 461 aaKnown RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 KRT4P19013 534 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 TAC1P20366 129 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 MST1P26927 711 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 SSR2P43308 183 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 HTR6P50406 440 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 RAP1GDS1P52306 607 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ZNF134P52741 427 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 MLLT10P55197 1068 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 LIM2P55344 173 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 RAB38P57729 211 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 OR4D2P58180 307 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 AP2B1P63010 937 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 HERVK_113P63132 956 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ID2Q02363 134 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ACTN3Q08043 901 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 ZNF844Q08AG5 666 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms