RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CCKBRP32239 447 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 GABRA3P34903 492 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 YAP1P46937 504 aaKnown RBP11.6□□□□□ -0.55
CHMP3-204ENST00000409727 HPCAP84074 193 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 MC2RQ01718 297 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 CHRNEQ04844 493 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 FOXD4Q12950 439 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-204ENST00000409727 NNATQ16517 81 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 DHRS13Q6UX07 377 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF321PQ8N8H1 164 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 COX18Q8N8Q8 333 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 CDRT4Q8N9R6 151 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 DNAJC9Q8WXX5 260 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF607Q96SK3 696 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 BDH2Q9BUT1 245 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 COQ10BQ9H8M1 238 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 IL1RAPQ9NPH3 570 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 EXD2Q9NVH0 621 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 GIN1Q9NXP7 522 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 BAG5Q9UL15 447 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 DTX4Q9Y2E6 619 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 SEC16AO15027 2179 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 IGKV3D-11A0A0A0MRZ8 115 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 MEN1O00255 615 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PRKNO60260 465 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 FCMRO60667 390 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PDE9AO76083 593 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 MFN2O95140 757 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 SEMG1P04279 462 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 TGM1P22735 817 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 MAGEA8P43361 318 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 EMDP50402 254 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 GNA13Q14344 377 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 IFI44LQ53G44 452 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 STPG1Q5TH74 334 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 FAM199XQ6PEV8 388 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 FIGNL1Q6PIW4 674 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 BPHLQ86WA6 291 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 KRT73Q86Y46 540 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 EPHX4Q8IUS5 362 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PTPMT1Q8WUK0 201 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 TMBIM1Q969X1 311 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ZG16BQ96DA0 208 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF184Q99676 751 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PRRX2Q99811 253 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 MESP1Q9BRJ9 268 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 STRADBQ9C0K7 418 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 OR8D2Q9GZM6 311 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 OR10A5Q9H207 317 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PIGUQ9H490 435 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 NTN4Q9HB63 628 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 FOLH1BQ9HBA9 442 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 TOR4AQ9NXH8 423 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF639Q9UID6 485 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 MKLN1Q9UL63 735 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 C15orf41Q9Y2V0 281 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 CLCA3PQ9Y6N3 262 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 IGHV3-20A0A0C4DH32 117 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 GXYLT2A0PJZ3 443 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 SOCS2O14508 198 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 CSO75390 466 aaKnown RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 SERPINB7O75635 380 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ZIC2O95409 532 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 RECKO95980 971 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 HEXBP07686 556 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 AGXTP21549 392 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 RORAP35398 523 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ETV5P41161 510 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 E2F1Q01094 437 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 TAF11Q15544 211 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 TRIP6Q15654 476 aaKnown RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 KIF26BQ2KJY2 2108 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ISXQ2M1V0 245 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 FAM69BQ5VUD6 431 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF385CQ66K41 422 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 ZBTB49Q6ZSB9 765 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 CBR4Q8N4T8 237 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 AMER2Q8N7J2 671 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 C16orf52Q8NHV5 167 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 VANGL1Q8TAA9 524 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 SENP5Q96HI0 755 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 SLC29A1Q99808 456 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PELOQ9BRX2 385 aaKnown RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 RSPO3Q9BXY4 272 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 FBXO8Q9NRD0 319 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 DNAJB9Q9UBS3 223 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 PISDQ9UG56 409 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 LIPT1Q9Y234 373 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 HEMK1Q9Y5R4 338 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 MAGED1Q9Y5V3 778 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-204ENST00000409727 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
CHMP3-204ENST00000409727 NUP210LQ5VU65 1888 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 COL27A1Q8IZC6 1860 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 A0A0G2JPF8 293 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms