RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DUXAA6NLW8 204 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 P2RX6O15547 441 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 NARSO43776 548 aaKnown RBP15.75■□□□□ 0.11
NUP50-202ENST00000396096 CPN2P22792 545 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 SNRPNP63162 240 aaKnown RBP15.75■□□□□ 0.11
NUP50-202ENST00000396096 CHRNEQ04844 493 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 INAVAQ3KP66 663 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 MFSD12Q6NUT3 480 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 CDC73Q6P1J9 531 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 BTLAQ7Z6A9 289 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 RSC1A1Q92681 617 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 KAT2AQ92830 837 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 MGLLQ99685 303 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 CCDC59Q9P031 241 aaKnown RBP15.75■□□□□ 0.11
NUP50-202ENST00000396096 MKLN1Q9UL63 735 aa15.75■□□□□ 0.11
NUP50-202ENST00000396096 GOLGA4Q13439 2230 aaKnown RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 TRBV23OR9-2A0A075B6M9 112 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 GSAPA4D1B5 854 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 FAM221BA6H8Z2 402 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 CSTF2P33240 577 aaKnown RBP eCLIP15.74■□□□□ 0.11
NUP50-202ENST00000396096 LTBRP36941 435 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 EFNB1P98172 346 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 CDK5Q00535 292 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 RUNX2Q13950 521 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 GPR18Q14330 331 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TCEA2Q15560 299 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 FAM214AQ32MH5 1076 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 ZNF404Q494X3 552 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 USP53Q70EK8 1073 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 DGLUCYQ7Z3D6 616 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 IQCHQ86VS3 1027 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 OR2L13Q8N349 312 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 CAMKVQ8NCB2 501 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 OR7G2Q8NG99 324 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 OR4K14Q8NGD5 310 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 RPLP0P6Q8NHW5 317 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 MCFD2Q8NI22 146 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 FGF11Q92914 225 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 SLC35A4Q96G79 324 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TMEM80Q96HE8 168 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 SLC6A18Q96N87 628 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 OR5M11Q96RB7 305 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TAPBPLQ9BX59 468 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TRIM45Q9H8W5 580 aaPredicted RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 POLMQ9NP87 494 aaPredicted RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 EQTNQ9NQ60 294 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 CLDND1Q9NY35 253 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TAS2R16Q9NYV7 291 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 DAPP1Q9UN19 280 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 LSM2Q9Y333 95 aaKnown RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 CHST2Q9Y4C5 530 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 ENTPD2Q9Y5L3 495 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 B3GALT2O43825 422 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 OCM2P0CE71 109 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 OCMP0CE72 109 aaPredicted RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 GABRG2P18507 467 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TNNI3P19429 210 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 ZNF10P21506 573 aaPredicted RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 GIPRP48546 466 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 PCYT1AP49585 367 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.74■□□□□ 0.11
NUP50-202ENST00000396096 TRAM2Q15035 370 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 INAQ16352 499 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 TIMM50Q3ZCQ8 353 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 C16orf62Q7Z3J2 963 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 WDR53Q7Z5U6 358 aaPredicted RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 HMGN2P46Q86SG4 172 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 MRGPREQ86SM8 312 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 ATCAYQ86WG3 371 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 WDR36Q8NI36 951 aaKnown RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 GPBAR1Q8TDU6 330 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 ADAMTS15Q8TE58 950 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 DIO2Q92813 273 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 QRSL1Q9H0R6 528 aaKnown RBP15.74■□□□□ 0.11
NUP50-202ENST00000396096 OR51E2Q9H255 320 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 DSN1Q9H410 356 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 LYRM4Q9HD34 91 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 DNAJC27Q9NZQ0 273 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 PTGFRNQ9P2B2 879 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 MMP17Q9ULZ9 603 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 SLC22A7Q9Y694 548 aa15.74■□□□□ 0.11
NUP50-202ENST00000396096 REV3LO60673 3130 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 SCN3AQ9NY46 2000 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 TCRBV21S2A2A0A5A6 115 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 OR6C74A6NCV1 312 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 CCRL2O00421 344 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 CYP7B1O75881 506 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 ZIC2O95409 532 aaPredicted RBP15.73■□□□□ 0.11
NUP50-202ENST00000396096 DBTP11182 482 aaKnown RBP15.73■□□□□ 0.11
NUP50-202ENST00000396096 POLR2CP19387 275 aaPredicted RBP15.73■□□□□ 0.11
NUP50-202ENST00000396096 TLX1P31314 330 aaPredicted RBP15.73■□□□□ 0.11
NUP50-202ENST00000396096 IFNGR2P38484 337 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 ZNF91Q05481 1191 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 ILF3Q12906 894 aaKnown RBP eCLIP15.73■□□□□ 0.11
NUP50-202ENST00000396096 GINS1Q14691 196 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 FAM111BQ6SJ93 734 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 Q6ZSR6 202 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 ABHD13Q7L211 337 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 ABI3BPQ7Z7G0 1075 aa15.73■□□□□ 0.11
NUP50-202ENST00000396096 VRK2Q86Y07 508 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms